14
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Moderate Activity

Commits : Listings

Analyzed 1 day ago. based on code collected 2 days ago.
Nov 05, 2025 — Nov 05, 2026
Commit Message Contributor Files Modified Lines Added Lines Removed Code Location Date
implemented profile-profile alignment More... over 16 years ago
refactored aligners More... over 16 years ago
First commit of basic file/folder structure for the biojava2-ws module, a module to link Biojava objects to various web resources for processing More... over 16 years ago
biojava3-protmod: make ProteinModificationParserUtil package private More... over 16 years ago
refactored aligners More... over 16 years ago
updating test Ligands in domains More... over 16 years ago
Scop domains now also with Ligands... More... over 16 years ago
adding support for SCOP also to user interface More... over 16 years ago
adding support for SCOP also to user interface More... over 16 years ago
adding support for SCOP also to user interface More... over 16 years ago
more demo of how to work with SCOP More... over 16 years ago
more improvements for SCOP parsing... More... over 16 years ago
biojava3-protmod: list unidenfiable modified residues. More... over 16 years ago
better javadoc More... over 16 years ago
better javadoc More... over 16 years ago
Adding support for SCOP file parsing More... over 16 years ago
making tmp dir public More... over 16 years ago
Adding support for SCOP file parsing More... over 16 years ago
Adding support for SCOP file parsing More... over 16 years ago
tests for alternate scorers More... over 16 years ago
implemented previously unsupported methods and added molecular weights More... over 16 years ago
minor: use String.format("%n") for line separator More... over 16 years ago
biojava3-protmod: remove prints when testing. More... over 16 years ago
tests for profile-profile alignment data structure More... over 16 years ago
tests for local alignment and improved max and min alignment scores More... over 16 years ago
biojava3-protmod: remove prints when testing. More... over 16 years ago
fixed tests in maven More... over 16 years ago
patch for dealing with modified residues More... over 16 years ago
minor: performance improvements from FindBugs More... over 16 years ago
tests, 1 bug fix, and minor updates More... over 16 years ago