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Analyzed about 20 hours ago. based on code collected 2 days ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Nov 05, 2025 — Nov 05, 2026 Showing page 219 of 243 Search / Filter on:
making sure test passes...	Andreas Prlic	More...				over 16 years ago
biojava3-protmod: using hasAminoAtoms() to determine a sequence residue.	Jianjiong Gao	More...				over 16 years ago
having problems with cruisecontrol in headless mode with this test. disabling for now	Andreas Prlic	More...				over 16 years ago
having problems with cruisecontrol in headless mode with this test. disabling for now	Andreas Prlic	More...				over 16 years ago
biojava3-protmod: additional attached groups that are not directly attached to residues.	Jianjiong Gao	More...				over 16 years ago
more javadoc	Andreas Prlic	More...				over 16 years ago
now also excluding l-peptide linking from being Ligands...	Andreas Prlic	More...				over 16 years ago
adding a fix if chem_comp.type contains more chars than specified here...	Andreas Prlic	More...				over 16 years ago
minor: todo comments	Mark Chapman	More...				over 16 years ago
profile-profile alignments	Mark Chapman	More...				over 16 years ago
local pairwise sequence alignments	Mark Chapman	More...				over 16 years ago
biojava3-protmod: parsing linkages that are not identified in any modification.	Jianjiong Gao	More...				over 16 years ago
this tests cant be run in headless mode, adding check for that	Andreas Prlic	More...				over 16 years ago
target should not be in svn	Andreas Prlic	More...				over 16 years ago
target should not be in svn...	Andreas Prlic	More...				over 16 years ago
this tests cant be run in headless mode, adding check for that	Andreas Prlic	More...				over 16 years ago
biojava3-protmod: more modifications; finished going over RESID.	Jianjiong Gao	More...				over 16 years ago
updates for profile-profile alignments	Mark Chapman	More...				over 16 years ago
EMBL is now ENA	Andy Yates	More...				over 16 years ago
biojava3-protmod: more modifications.	Jianjiong Gao	More...				over 16 years ago
Introduced a "View Aligned Pairs" menu option in the alignment GUI, which formats an alignment as a list of equivalent residues. It can be called programmatically from AfpChainWriter.toAlignedPairs().	sbliven as Spencer Bliven	More...				over 16 years ago
EMBL is now ENA	Andy Yates	More...				over 16 years ago
Second pass of the parser. Now can support some quite horrible locations. Still need the methods to do more complex maths & operations one may like to do with locations.	Andy Yates	More...				over 16 years ago
these tests cant be run in headless mode, adding check for that	Andreas Prlic	More...				over 16 years ago
fixing encoding issue with umlaut	Andreas Prlic	More...				over 16 years ago
fixing encoding issue with umlaut	Andreas Prlic	More...				over 16 years ago
fixing encoding issue with umlaut	Andreas Prlic	More...				over 16 years ago
mini cleanup	Andreas Prlic	More...				over 16 years ago
fixing encoding issue with umlaut	Andreas Prlic	More...				over 16 years ago
fixing encoding issue with umlaut	Andreas Prlic	More...				over 16 years ago

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