Project Summary
BioJava is an open-source project dedicated to providing a Java framework for processing biological data. It include objects for manipulating biological sequences, file parsers, DAS client and server support, access to BioSQL and Ensembl databases, tools for making sequence analysis GUIs and powerful analysis and statistical routines including a dynamic programming toolkit.
BioJava is used in several real-world bioinformatics applications and has been used for bioinformatics analysis in a number of published studies.
Badges
In a Nutshell, BioJava...
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has a well established, mature codebase
maintained by a large development team
with stable Y-O-Y commits -
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took an estimated 296 years of effort (COCOMO model)
starting with its first commit in September, 2009
ending with its most recent commit 7 days ago
MIT
Permitted
Commercial Use
Modify
Distribute
Place Warranty
Use Patent Claims
Forbidden
Sub-License
Hold Liable
Required
Distribute Original
Disclose Source
Include Copyright
State Changes
Include License
Include Install Instructions
These details are provided for information only. No information here is legal advice and should not be used as such.
Project Security
Vulnerabilities per Version ( last 10 releases )
There are no reported vulnerabilities
Project Vulnerability Report
Security Confidence Index
Vulnerability Exposure Index
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30 Day SummaryAug 10 2026 — Sep 9 2026
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12 Month SummarySep 9 2025 — Sep 9 2026
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