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Analyzed about 24 hours ago. based on code collected 2 days ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Nov 05, 2025 — Nov 05, 2026 Showing page 200 of 243 Search / Filter on:
New methods to add getting/setting EXPECT and WORD_SIZE parameters	Sylvain Foisy	More...				over 15 years ago
More bug fixes: checking for null program or null database now works with new code	Sylvain Foisy	More...				over 15 years ago
Bug fixes	Sylvain Foisy	More...				over 15 years ago
new setter method that allows to manipulate internal alignment matrix from outside	Andreas Prlic	More...				over 15 years ago
biojava3-protmod: using LinkedHashSet to keep order of keywords	Jianjiong Gao	More...				over 15 years ago
Improved DotPlot coloring.	sbliven as Spencer Bliven	More...				over 15 years ago
biojava3-protmod: wrong return value in StructureGroup.equals	Jianjiong Gao	More...				over 15 years ago
fixing a problem when reconstructing old XML serializations of structure alignments	Andreas Prlic	More...				over 15 years ago
adding a demo for how to split domains with PDP	Andreas Prlic	More...				over 15 years ago
fixing dependency on previous version of core	Andreas Prlic	More...				over 15 years ago
increasing maxmem for javadoc plugin	Andreas Prlic	More...				over 15 years ago
increasing maxmem for javadoc plugin	Andreas Prlic	More...				over 15 years ago
setting javadoc maxmem of 512M	Andreas Prlic	More...				over 15 years ago
now correctly tracking for BioJava	Andreas Prlic	More...				over 15 years ago
now configured for biojava google analytics	Andreas Prlic	More...				over 15 years ago
new flag for verbosity level	Andreas Prlic	More...				over 15 years ago
new flag for verbosity level	Andreas Prlic	More...				over 15 years ago
now all systematic calculations will also calculate the tmScore	Andreas Prlic	More...				over 15 years ago
removing warnings	Andreas Prlic	More...				over 15 years ago
less verbose	Andreas Prlic	More...				over 15 years ago
speed up of junit tests	Andreas Prlic	More...				over 15 years ago
speed up of junit tests	Andreas Prlic	More...				over 15 years ago
speed up of junit tests	Andreas Prlic	More...				over 15 years ago
speed up of junit tests	Andreas Prlic	More...				over 15 years ago
speed up of junit tests	Andreas Prlic	More...				over 15 years ago
test flipping and serilisation of TMscores	Andreas Prlic	More...				over 15 years ago
no more random system.out	Andreas Prlic	More...				over 15 years ago
fixing javadoc warnings	Andreas Prlic	More...				over 15 years ago
now also using TM scores	Andreas Prlic	More...				over 15 years ago
new, reads Tmscore, if available	Andreas Prlic	More...				over 15 years ago

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