14
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Moderate Activity

Commits : Listings

Analyzed 1 day ago. based on code collected 2 days ago.
Nov 05, 2025 — Nov 05, 2026
Commit Message Contributor Files Modified Lines Added Lines Removed Code Location Date
fixing more index boundary issues More... over 15 years ago
adding a length check for the alignment formatting More... over 15 years ago
now trimming to match nucleotides More... over 15 years ago
now trying a quick matching of SEQRES and ATOM records first, before falling back to aligning them. More... over 15 years ago
added biojava3-aa-prop to modules More... over 15 years ago
git-svn-id: http://code.open-bio.org/repos/biojava/biojava-live/trunk@8909 7c6358e6-4a41-0410-a743-a5b2a554c398 More... over 15 years ago
git-svn-id: http://code.open-bio.org/repos/biojava/biojava-live/trunk@8908 7c6358e6-4a41-0410-a743-a5b2a554c398 More... over 15 years ago
git-svn-id: http://code.open-bio.org/repos/biojava/biojava-live/trunk@8907 7c6358e6-4a41-0410-a743-a5b2a554c398 More... over 15 years ago
adding check for null value More... over 15 years ago
adding check for null value More... over 15 years ago
adding check for null value More... over 15 years ago
checking for null value More... over 15 years ago
git-svn-id: http://code.open-bio.org/repos/biojava/biojava-live/trunk@8902 7c6358e6-4a41-0410-a743-a5b2a554c398 More... over 15 years ago
git-svn-id: http://code.open-bio.org/repos/biojava/biojava-live/trunk@8901 7c6358e6-4a41-0410-a743-a5b2a554c398 More... over 15 years ago
git-svn-id: http://code.open-bio.org/repos/biojava/biojava-live/trunk@8900 7c6358e6-4a41-0410-a743-a5b2a554c398 More... over 15 years ago
git-svn-id: http://code.open-bio.org/repos/biojava/biojava-live/trunk@8899 7c6358e6-4a41-0410-a743-a5b2a554c398 More... over 15 years ago
Merging modifications by Amr Al-Hossary to allow fetching obsolete PDB IDs from AtomCache and PDBFileReader.
sbliven
as Spencer Bliven
More... over 15 years ago
Modified PDBStatus for more robust support for obsolete files, including multiple current versions of obsolete IDs. Compatible with the 4/26/2011 release of the PDB website.
sbliven
as Spencer Bliven
More... over 15 years ago
now a static method More... over 15 years ago
new utility method for creating fake structure objects More... over 15 years ago
fixing an error if no scop domains are found More... over 15 years ago
workaround for out of index error More... over 15 years ago
Changed PDBStatus.
sbliven
as Spencer Bliven
More... over 15 years ago
adding new parameter More... over 15 years ago
adding a couple of new ways to interact with the internals from the outside, also some code cleanup More... over 15 years ago
adding new event listener class More... over 15 years ago
Fixed exception in PDBStatus that occured when a ID was made obsolete but not replaced.
sbliven
as Spencer Bliven
More... over 15 years ago
Added bio.structure.PDBStatus class, which provides utility methods for handling obsolete PDB IDs.
sbliven
as Spencer Bliven
More... over 15 years ago
Clearing up something which has been wrong for some time. The code changed an init met even without looking at if the codon was an initiator More... over 15 years ago
preventing a nullpointer exception from being thrown here. More... over 15 years ago