14
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Moderate Activity

Commits : Listings

Analyzed 1 day ago. based on code collected 2 days ago.
Nov 05, 2025 — Nov 05, 2026
Commit Message Contributor Files Modified Lines Added Lines Removed Code Location Date
Fix a problem that appeared in the NCBI QBlast service where using the FORMAT_OBJECT=ALIGNMENT tag in the URL would return no results from the getAlignementResults method... More... over 15 years ago
A few obvious improvements for Constraints class. (Ah Fu see TODO & FIXME) More... over 15 years ago
Resolving conflict More... over 15 years ago
More TODOs for Ah Fu More... over 15 years ago
Add an example test case. Ah Fu to complete More... over 15 years ago
git-svn-id: http://code.open-bio.org/repos/biojava/biojava-live/trunk@8970 7c6358e6-4a41-0410-a743-a5b2a554c398 More... over 15 years ago
Set flag in structure that indicates if structure was loaded from a biological assembly file (i.e. *.pdb1.gz). More... over 15 years ago
Added biologicalAssembly flag that indicates if this structure was loaded from a biological assembly file (i.e. *.pdb.gz). More... over 15 years ago
Added biologicalAssembly flag that indicates if this structure was loaded from a biological assembly file (i.e. *.pdb.gz). More... over 15 years ago
git-svn-id: http://code.open-bio.org/repos/biojava/biojava-live/trunk@8966 7c6358e6-4a41-0410-a743-a5b2a554c398 More... over 15 years ago
Removed commented out code. More... over 15 years ago
Added methods to download biological assembly files. More... over 15 years ago
Added method to load biological assembly by pdbId and bioAssemblyId. More... over 15 years ago
git-svn-id: http://code.open-bio.org/repos/biojava/biojava-live/trunk@8962 7c6358e6-4a41-0410-a743-a5b2a554c398 More... over 15 years ago
adding MODEL as a status More... over 15 years ago
git-svn-id: http://code.open-bio.org/repos/biojava/biojava-live/trunk@8960 7c6358e6-4a41-0410-a743-a5b2a554c398 More... over 15 years ago
refinement - now only ignoring hetatom groups More... over 15 years ago
less verbose More... over 15 years ago
adding another check for things that can go wrong with seqres mapping More... over 15 years ago
fixing an endless loop that can happen with v. long headers More... over 15 years ago
testing for a possible endless loop in long headers More... over 15 years ago
remove white spaces from user input More... over 15 years ago
now correctly using the global PDB path More... over 15 years ago
now propagating fileParsingparameters More... over 15 years ago
biojava3-protmod: update test case for serialization More... over 15 years ago
biojava3-protmod: changing labels to component and atom More... over 15 years ago
biojava3-protmod: removing entry of id 0096 in xml More... over 15 years ago
adding check for null More... over 15 years ago
cleanup More... over 15 years ago
adding a reset method More... over 15 years ago