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Analyzed about 24 hours ago. based on code collected 2 days ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Nov 05, 2025 — Nov 05, 2026 Showing page 192 of 243 Search / Filter on:
Improved documentation (and testing) of getting a structure by range.	sbliven as Spencer Bliven	More...				about 15 years ago
Improved Exception documentation in FastaReader	sbliven as Spencer Bliven	More...				about 15 years ago
Rearrange resources to fit into maven model. Use standard maven jar plugin in favour of assembly plugin.	Peter Troshin	More...				about 15 years ago
Added dummy id to be allowed in the xml file of AminoAcidComposition. It will be used in future to compute the mass of amino acid instead of based on elements.	Chuan Hock Koh	More...				about 15 years ago
now checking if the groups have any atoms (can be the case in c-alpha only representation)	Andreas Prlic	More...				about 15 years ago
Getting rid of target directory - content is autogenerated so no need to store in svn	Peter Troshin	More...				about 15 years ago
Added glycosylation entries 386-429.	Peter Rose	More...				about 15 years ago
empty commit to trigger auto-build	Andreas Prlic	More...				about 15 years ago
executable jar is now built during mvn package	Andreas Prlic	More...				about 15 years ago
no need to have a Jar file at this location...	Andreas Prlic	More...				about 15 years ago
Added SequenceName in the output of AAProperties.jar (in the first column) Adjusted pom.xml to include AAProperties as part of name but still has jar-with-dependencies in the name	Chuan Hock Koh	More...				about 15 years ago
Adjust the configuration of pom.xml to generate a jar file with org.biojava3.aaproperties.CommandPrompt as the main class. However, need to rename it to AAProperties.jar	Chuan Hock Koh	More...				about 15 years ago
updating test to new remediated version	Andreas Prlic	More...				over 15 years ago
less verbose	Andreas Prlic	More...				over 15 years ago
updating test to new remediated version	Andreas Prlic	More...				over 15 years ago
fixing patch provided by Tariq	Andreas Prlic	More...				over 15 years ago
New packaging task for making executable jar - working but have issues	Peter Troshin	More...				over 15 years ago
Project build file updates	Peter Troshin	More...				over 15 years ago
adding the jar maven task	Peter Troshin	More...				over 15 years ago
Only consider cases difference for Molecular Weight. Revert all cases consideration for other properties	Chuan Hock Koh	More...				over 15 years ago
Test cases/examples	Peter Troshin	More...				over 15 years ago
The API implementation and javadocs docs	Peter Troshin	More...				over 15 years ago
Add an API to the prediction functions.	Peter Troshin	More...				over 15 years ago
Getting rid of dependencies - updating the project pom	Peter Troshin	More...				over 15 years ago
Package rename	Peter Troshin	More...				over 15 years ago
Hook up the protein disorder module	Peter Troshin	More...				over 15 years ago
Project file corrected	Peter Troshin	More...				over 15 years ago
Initial import of code for protein disorder calculation.	Peter Troshin	More...				over 15 years ago
Updated the cookbook on using extended XML file and ModifiedAACompoundSet Split up the CommandPrompt run to be more "unit" style Had always assumed that cases are ignored, hence had to change many method to consider case difference Introduced another class CaseFreeAminoAcidCompoundSet to ignore cases By default, set ignore case. If they provide the XML file, then cases will be differentiated Update the cookbook on Command Prompt	Chuan Hock Koh	More...				over 15 years ago
Fixed PSI_MOD cross reference for entry 0002, added PDBCC cross references to all entries (where available). Added revision section.	Peter Rose	More...				over 15 years ago

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