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Analyzed 1 day ago. based on code collected 2 days ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Nov 05, 2025 — Nov 05, 2026 Showing page 194 of 243 Search / Filter on:
Fixed storeUnAlignedSeqRes so it works for biological assemblies (need to loop over all models, rather than just use first model).	Peter Rose	More...				over 15 years ago
Added metals as separate entries so they can be searched. Added multiple oxidation states of metals.	Peter Rose	More...				over 15 years ago
giving precise CE version number and reference	Andreas Prlic	More...				over 15 years ago
giving precise CE version number and reference	Andreas Prlic	More...				over 15 years ago
ignoring missing chain ids	Andreas Prlic	More...				over 15 years ago
making access public	Andreas Prlic	More...				over 15 years ago
now can store SEQRES without aligning them	Andreas Prlic	More...				over 15 years ago
now can store SEQRES without aligning them	Andreas Prlic	More...				over 15 years ago
Implemented the APIs for generation of PROFEAT properties. Also implemented adaptor methods for ease of using the APIs.	Chuan Hock Koh	More...				over 15 years ago
Removed invalid UTF-8 characters	Chuan Hock Koh	More...				over 15 years ago
trying to set UTF encoding here, hoping to resolve the cruisecontrol issue	Andreas Prlic	More...				over 15 years ago
attempt to remove the characters that could cause the failure in build	Chuan Hock Koh	More...				over 15 years ago
Added new modification 313-319	Peter Rose	More...				over 15 years ago
Populate two elements based on Peter's Element class. Create a ElementTester to test the generated xml and its computed standard atomic weight. Also created several classes to prepare for the generation of additional physiochemical-related properties.	Chuan Hock Koh	More...				over 15 years ago
One way to model the elements	Peter Troshin	More...				over 15 years ago
Create a new package org.biojava3.aaproperties.xml and two new classes IsotopeType and IsotopeTable as an initial effort to learn and utilize JAXB.	Chuan Hock Koh	More...				over 15 years ago
Updated javadoc for isBiologicalAssembly()	Peter Rose	More...				over 15 years ago
Remove all catch NullPointerException in test cases and used expected = NullPointerException.class. Change all adaptor methods to by default return precise values and only fix their precision for test cases.	Chuan Hock Koh	More...				over 15 years ago
Remove the molecularweight.jaxb package as it was done in the wrong way.	Chuan Hock Koh	More...				over 15 years ago
Advice & TODO for Ah Fu	Peter Troshin	More...				over 15 years ago
Attempt to use JAXB	Chuan Hock Koh	More...				over 15 years ago
beans are now serializable	Andreas Prlic	More...				over 15 years ago
now serializable	Andreas Prlic	More...				over 15 years ago
providing an interface and factory on top of a SCOP installation, so we can also plug in database-backed installations.	Andreas Prlic	More...				over 15 years ago
Some fixes for Division in EMBL and GenBank formats	George Waldon	More...				over 15 years ago
Added test cases where users gave "bad" input to the properties generating methods. All test cases are successful now.	Chuan Hock Koh	More...				over 15 years ago
Removed Javadocs from repos	Chuan Hock Koh	More...				over 15 years ago
Advice & TODO for Ah Fu	Peter Troshin	More...				over 15 years ago
Implemented JUnit test cases for all properties. Added an additional property, absorbance. Added several more adaptor methods.	Chuan Hock Koh	More...				over 15 years ago
new filterByClassificationId method	Andreas Prlic	More...				over 15 years ago

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