14
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Commits : Listings

Analyzed 1 day ago. based on code collected 2 days ago.
Nov 05, 2025 — Nov 05, 2026
Commit Message Contributor Files Modified Lines Added Lines Removed Code Location Date
corrected the fetch url, not writing into cache when cache directory not specified and breaking correctly after fetching the entry xml More... about 12 years ago
Removing empty class
sbliven
as Spencer Bliven
More... about 12 years ago
Adding toXYZString method to prettify CrystalTransform output
sbliven
as Spencer Bliven
More... about 12 years ago
making access method public More... about 12 years ago
Added defaults to StructureInterfaceList asaCalc
sbliven
as Spencer Bliven
More... about 12 years ago
added uniprot id pattern matching to fail-fast on wrong uniprot ids, added retrying netwrok request if id is not available immediately, bubbling-up the error codes in case uniprot servers are down More... about 12 years ago
Add default parameters for interface definitions
sbliven
as Spencer Bliven
More... about 12 years ago
Minor changes to xtal and contacts packages
sbliven
as Spencer Bliven
More... about 12 years ago
upgrading to latest log4j More... about 12 years ago
started to work on a parser for Phosphosite data (data under CCBY_NC) http://www.phosphosite.org More... about 12 years ago
Merge pull request #199 from josemduarte/master More... about 12 years ago
Fixing #193 - also some improvement for #191: now a TranslationException will be thrown when compound not known - a few improvements for other issues: #111, #155, #185 More... about 12 years ago
changes for IntelliJ More... about 12 years ago
changes for reading Ensembl Genbank files More... about 12 years ago
changes for reading Ensembl Genbank files More... about 12 years ago
Improving logging & exceptions in JFatCatClient
sbliven
as Spencer Bliven
More... about 12 years ago
Removing warnings
sbliven
as Spencer Bliven
More... about 12 years ago
Merge pull request #198 from sbliven/master
sbliven
as Spencer Bliven
More... about 12 years ago
Changing maven package for protein-comparison-tool to shade
sbliven
as Spencer Bliven
More... about 12 years ago
reloaded support for AccessionID parsing More... about 12 years ago
changing signature AbstractFeature.setLocation(AbstractLocation l) More... about 12 years ago
export location logic parsing from GenbankSequenceParser to InsdcParser More... about 12 years ago
SequenceLocation 's Sequence reference recover More... about 12 years ago
test ffixings More... about 12 years ago
unusing FeatureParser More... about 12 years ago
manual rebase More... about 12 years ago
Removing ad-hoc logger verbosity control More... about 12 years ago
Merge pull request #194 from benjamintboyle/master More... about 12 years ago
More #111 More... about 12 years ago
Removing warnings More... about 12 years ago