BioJava

Settings | Report Duplicate

14

I Use This!

Moderate Activity

Commits : Listings

Analyzed 1 day ago. based on code collected 2 days ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Nov 05, 2025 — Nov 05, 2026 Showing page 136 of 243 Search / Filter on:
Modified class name (and references) from "ProgessListenerStub" to "ProgressListenerStub"	Benjamin Boyle	More...				about 12 years ago
Updated org.biojava3.phylo package to use slf4j for logging #155	Benjamin Boyle	More...				about 12 years ago
Updated org.biojava3.ontology package to use slf4j #155	Benjamin Boyle	More...				about 12 years ago
Updated org.biojava3.modfinder package to use slf4j	Benjamin Boyle	More...				about 12 years ago
Fix logger class name #155	Benjamin Boyle	More...				about 12 years ago
Adding some better javadoc to clarify ambiguity in atom names	josemduarte	More...				about 12 years ago
Merge pull request #174 from sbliven/mmCIF	Andreas Prlic	More...				about 12 years ago
Adding a test for correct writing of atom names in PDB format	josemduarte	More...				about 12 years ago
More #111 and #155	josemduarte	More...				about 12 years ago
Full fix for #148, all tests pass - some improvement in exceptions and logging #111 and #155	josemduarte	More...				about 12 years ago
Towards fixing #148, compiles but some tests don't pass yet - some exception handling fixes #111 - important bug fixed in alt loc handling, the lookup map for atom names wasn't properly reset when adding a new alt loc group - fixed implementation of StructureTools.getBackboneAtomArray (was including CB atoms, and excluding all GLY groups) - added some tests for the StructureTools methods	Jose Manuel Duarte	More...				about 12 years ago
Fix #173. Use mmCIF as default structure format	sbliven as Spencer Bliven	More...				about 12 years ago
Fix problems exposed by using mmCIF files (towards #173)	sbliven as Spencer Bliven	More...				about 12 years ago
Fix #172. ResidueNumbers use the old chain IDs when read from mmCIF	sbliven as Spencer Bliven	More...				about 12 years ago
Merge pull request #171 from benjamintboyle/master	Jose Manuel Duarte	More...				about 12 years ago
Convert org.biojava3.genome to slf4j #155	Benjamin Boyle	More...				about 12 years ago
Adding missing log4j2.xml files and unifying config across modules #155	Jose Manuel Duarte	More...				about 12 years ago
Merge pull request #170 from benjamintboyle/master	Jose Manuel Duarte	More...				about 12 years ago
Convert org.biojava3.alignment package to use slf4j	Benjamin Boyle	More...				about 12 years ago
Convert org.biojava3.aaproperties package to slf4j logging, mostly updated println	Benjamin Boyle	More...				about 12 years ago
Merge pull request #26 from biojava/master	emckee2006	More...				about 12 years ago
Solving issue #145	Jose Manuel Duarte	More...				about 12 years ago
Merge pull request #168 from josemduarte/master	Jose Manuel Duarte	More...				about 12 years ago
Merge branch 'master' of https://github.com/biojava/biojava	Jose Manuel Duarte	More...				about 12 years ago
Merge pull request #167 from josemduarte/master	Jose Manuel Duarte	More...				about 12 years ago
Merge pull request #166 from benjamintboyle/master	Jose Manuel Duarte	More...				about 12 years ago
Solving issue #160	Jose Manuel Duarte	More...				about 12 years ago
Better logging and remove some warnings, #155	Jose Manuel Duarte	More...				about 12 years ago
Fixing the other half of #162	Jose Manuel Duarte	More...				about 12 years ago
Convert core src/test/java to slf4j #155	Benjamin Boyle	More...				about 12 years ago

←
1
2
…
132
133
134
135
136
137
138
139
140
…
242
243
→