| adding tmScore to display |
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over 16 years ago
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| git-svn-id: http://code.open-bio.org/repos/biojava/biojava-live/trunk@7639 7c6358e6-4a41-0410-a743-a5b2a554c398 |
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over 16 years ago
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| Changed SVDSuperimposer to report TM scores. Removed a couple unnecessary print statements from CeMain |
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over 16 years ago
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| Added additional scoring metrics to the AlignBenchmark. Updated AlignBenchmark to take command line arguments. Fixed aditional bugs in the structure.align.benchmark package. |
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over 16 years ago
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| incrementing version in docu |
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over 16 years ago
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| Heavily improved alignment UI |
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over 16 years ago
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| Removed a couple more problematic C-termini from CPDB |
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over 16 years ago
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| Fix to NUC matrix file parsing. |
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over 16 years ago
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| Removing partial c-terminal residue from CPDB files |
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over 16 years ago
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| Fixed CPDB bugs with insertion codes on the right |
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over 16 years ago
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| Removed c-terminal residues containing only a N atom |
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over 16 years ago
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| Fixed a couple more residues from CPDB |
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over 16 years ago
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| Fixing CPDB entries with negative residue numbers |
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over 16 years ago
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| Updated CPDB and RIPC alignments to correct for missing residue numbers & updated amino acid codes |
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over 16 years ago
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| more javadoc |
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over 16 years ago
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| fixed wrong display with new alignment module |
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over 16 years ago
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| fixing broken aligner |
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over 16 years ago
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| fixing a off by 1 error |
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over 16 years ago
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| Added CPDB benchmarking data to the structure module's test resources. |
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over 16 years ago
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| Removed @Override tag from interface implementations to allow compilation with Java 1.5. |
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over 16 years ago
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| Added a test package, org.biojava.bio.structure.align.benchmark. |
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over 16 years ago
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| no more stand alone DB search GUI... |
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over 16 years ago
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| User interface has been massively improved, in particular DB searches... |
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over 16 years ago
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| Deepak's patch for exceptions. |
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over 16 years ago
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| adding comment |
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over 16 years ago
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| update to latest version of Alignment module |
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over 16 years ago
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| adding new demo for Smith Waterman based 3D structure overlay |
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over 16 years ago
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| #3035 fixing bug reported by Hiroyuki Nakagawa |
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over 16 years ago
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| fixing nullpointer exception |
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over 16 years ago
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| update to latest version of alignment module |
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over 16 years ago
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