| Throw an IllegalArgumentException if the regex doesn't match! (related to #244). |
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almost 12 years ago
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| Made ResidueRange.contains() work even when the start or end is missing (related to fixes for issue #247). |
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almost 12 years ago
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| Removing parsing of Z value in CRYST1 record, it is redundant and can cause problems. - fixed issue with parsing of "badly" formatted cryst1 records (e.g. phenix files don't have a z value) - improved long parsing pdb vs mmcif test - removed some warnings |
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almost 12 years ago
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| Merge pull request #247 from sbliven/fix244 |
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almost 12 years ago
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| excluding demo directory from packaging |
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almost 12 years ago
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| excluding demo directory from packaging |
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almost 12 years ago
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| Fixed bug in getPredominantGroupType: wasn't accounting for waters correctly |
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almost 12 years ago
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| Fixing bug: cloning was not done correctly for multi-model structures also improved cross references test |
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almost 12 years ago
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| Renaming calcLength to getLength to prevent confusion |
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almost 12 years ago
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| Reverting to old version of 1a4w |
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almost 12 years ago
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| Adding conversion of '_' to a chain name in ResidueRanges |
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almost 12 years ago
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| Fixing a broken test |
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almost 12 years ago
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| updating to latest version of external dependencies |
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almost 12 years ago
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| updating the phylo package to use the uploaded forester dependency from maven central. |
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almost 12 years ago
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| #241 refactoring quaternary symmetry project into biojava-structure |
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almost 12 years ago
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| Merge pull request #33 from biojava/master |
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almost 12 years ago
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| Fix #244 AtomPositionMap calculations |
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almost 12 years ago
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| Adding tests for length. |
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almost 12 years ago
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| Removing single-character chain methods in AtomPositionMap |
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almost 12 years ago
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| Reducing redundancy in CECPParameters constructor |
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almost 12 years ago
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| slightly less verbose when setting system properties to defaults |
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almost 12 years ago
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| Switching AtomPositionMap to use more standard AminoAcid type detection |
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almost 12 years ago
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| Fixing a warning |
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almost 12 years ago
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| Support multi-character chains in ResidueRange (#81) |
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almost 12 years ago
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| Reverting parts of 45235c07b7f2d056274565a021b86d3ee2c5f76c: global alignment remains purely global (opening penalty is applied at beginning of sequence). |
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almost 12 years ago
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| Fixing error with parsing PDB SITE records |
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almost 12 years ago
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| Fixed bug: was null pointing in interface calculation for crystallographic entries without a crystal cell given |
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almost 12 years ago
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| Dealing better with unreasonable crystal cells |
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almost 12 years ago
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| Merge remote-tracking branch 'upstream/master' |
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almost 12 years ago
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| Fixed mmcif parsing bug: entry 2ifo was null pointing |
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almost 12 years ago
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