14
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Moderate Activity

Commits : Listings

Analyzed about 19 hours ago. based on code collected 2 days ago.
Nov 06, 2025 — Nov 06, 2026
Commit Message Contributor Files Modified Lines Added Lines Removed Code Location Date
Imports
sbliven
as Spencer Bliven
More... over 11 years ago
Improvements to ScopInstallation
sbliven
as Spencer Bliven
More... over 11 years ago
Adding ECOD parser (Evolutionary Classification of Protein Domains)
sbliven
as Spencer Bliven
More... over 11 years ago
Merge pull request #255 from jgrzebyta/patch More... over 11 years ago
Merge commit biojava/patch More... over 11 years ago
Merge pull request #256 from jgrzebyta/patch-timeout More... over 11 years ago
in case of TimeoutException try to repeat block 10 times More... over 11 years ago
increase timeout in downloadFile method to 60sec (build #636 had error) More... over 11 years ago
prepare more generic method to prepare ULRConnection with customised timeout More... over 11 years ago
increase timeouts to 20 sec More... over 11 years ago
set fixed connection and read timeouts to 15 sec More... over 11 years ago
GenbankProxySequenceReader throws error if GI is for not protein sequence sequence whereas AminoAcidCompoundSet is declared added additional test More... over 11 years ago
update taxonomy id, taxonomy name and accession id tests More... over 11 years ago
revoke deleted tests More... over 11 years ago
create new simple InsdcParser test add loading parent DNASequence in factory change logger levels in GenbankProxySequenceReader add documentation to tests More... over 11 years ago
fixed issue #254 More... over 11 years ago
Merge pull request #253 from jgrzebyta/patch More... over 11 years ago
adding snapshot repository information. More... over 11 years ago
add CDS>>'coded_by' test for simple example More... over 11 years ago
add toString to Qualifier More... over 11 years ago
Merge remote-tracking branch 'upstream/master' More... over 11 years ago
Merge branch 'minor' More... over 11 years ago
Merge branch 'patch' into minor More... over 11 years ago
Making constant public More... over 11 years ago
adding citation More... over 11 years ago
Merge branch 'minor' More... over 11 years ago
Merge branch 'patch' into minor More... over 11 years ago
Fixed issue in SmithWaterman3Daligner: now checking for empty alignments and throwing exception. Related to #111 More... over 11 years ago
Some exception handling fixes (#111) More... over 11 years ago
Fixing bug in cloning for very exotic entries like 1pdt More... over 11 years ago