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Commits : Listings

Analyzed about 14 hours ago. based on code collected 2 days ago.
Nov 06, 2025 — Nov 06, 2026
Commit Message Contributor Files Modified Lines Added Lines Removed Code Location Date
fix #273 - the details field in _struct_ncs_oper is not mandatory and is missing in PDB ID 4X2S More... over 11 years ago
fix #273 - the details field in _struct_ncs_oper is not mandatory and is missing in PDB ID 4X2S More... over 11 years ago
Create an AlignmentJmol superclass More... over 11 years ago
Pose translation and rotationMatrix More... over 11 years ago
Comment and rename variables More... over 11 years ago
Core DS of MultipleAlignment Object More... over 11 years ago
Merge branch 'patch' into minor More... over 11 years ago
Merge branch 'minor' More... over 11 years ago
Merge remote-tracking branch 'upstream/minor' into minor More... over 11 years ago
Merge remote-tracking branch 'upstream/patch' into patch More... over 11 years ago
Merge branch 'patch' into minor More... over 11 years ago
Fixing resizing problem in BiojavaJmol as in commit 52346f9 More... over 11 years ago
Fix bug with missing information More... over 11 years ago
Merge branch 'minor' into master
sbliven
as Spencer Bliven
More... over 11 years ago
Merge branch 'patch' into minor
sbliven
as Spencer Bliven
More... over 11 years ago
Merge pull request #272 from sbliven/minor
sbliven
as Spencer Bliven
More... over 11 years ago
Adding long-running ECOD test. Must be run manually.
sbliven
as Spencer Bliven
More... over 11 years ago
Allow single-residue ranges
sbliven
as Spencer Bliven
More... over 11 years ago
Updated PolymerType and ResidueType for mmCIF 4.052
sbliven
as Spencer Bliven
More... over 11 years ago
Be more flexible with incorrect structure ranges
sbliven
as Spencer Bliven
More... over 11 years ago
Merge pull request #271 from lafita/patch More... over 11 years ago
Changing nucleotide structural comparisons to use Phosphate atom
sbliven
as Spencer Bliven
More... over 11 years ago
Removed AFPChain blockColors variable More... over 11 years ago
Merge pull request #35 from biojava/master More... over 11 years ago
Permission changes More... over 11 years ago
Fixing divided by zero issue in averageScore More... over 11 years ago
Added averageSimilarityScore to StructureInterfaceCluster More... over 11 years ago
Now getAlignedResIndex will return -1 if there's seqres groups available but the group is not found in them More... over 11 years ago
More clean-up: removed all warnings in structure package More... over 11 years ago
Fixing issue introduced in 543d730: mmcif parser was not doing nucleotide parsing correctly. Now TestLongPdbVsMmCifParsing passes. Also: - removed the UnknownPdbAminoAcidException to make things more consistent - undeprecating StructureTools Calpha methods because they can still be valid for some purposes - deprecating some inconsistently named method in StructureTools More... over 11 years ago