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Analyzed 1 day ago. based on code collected 1 day ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Oct 09, 2025 — Oct 09, 2026 Showing page 237 of 243 Search / Filter on:
fixing wrong reflection calls	Andreas Prlic	More...				over 16 years ago
fixed incorrect arguments size check	Andreas Prlic	More...				over 16 years ago
now can parse a structure from a URL	Andreas Prlic	More...				over 16 years ago
removed warning	Andreas Prlic	More...				over 16 years ago
now supports URLs as arguments	Andreas Prlic	More...				over 16 years ago
now supports InputStreams from URLs	Andreas Prlic	More...				over 16 years ago
now using /tmp as default location	Andreas Prlic	More...				over 16 years ago
does not need to be synchronized	Andreas Prlic	More...				over 16 years ago
adding new command line arguments -file1 and -file2	Andreas Prlic	More...				over 16 years ago
making methods protected, rather than private, so this class can be extended	Andreas Prlic	More...				over 16 years ago
nicer demo	Andreas Prlic	More...				over 16 years ago
fixing important display bug which would not show the correct PDB residue number positions in the toFatCat and toCE methods	Andreas Prlic	More...				over 16 years ago
adding a destroy() method and clear() method	Andreas Prlic	More...				over 16 years ago
making method public	Andreas Prlic	More...				over 16 years ago
more general approach to build up jmol script	Andreas Prlic	More...				over 16 years ago
now server location is a parameter	Andreas Prlic	More...				over 16 years ago
adding a test for parsing an alignment server	Andreas Prlic	More...				over 16 years ago
now supports alternate FTP server locations	Andreas Prlic	More...				over 16 years ago
javadoc improvements	Andreas Prlic	More...				over 16 years ago
new demo for how to load PDB files	Andreas Prlic	More...				over 16 years ago
Changed FastaParser Main to use the package test resources instead of developer-specific directory. Added Pfam selex seed multiple sequence alignment to biojava3.core.sequence test resources to start building a parser for this.	JulesJacobsen as Jules Jacobsen	More...				over 16 years ago
making the server location in the JFatCatClient optional	Andreas Prlic	More...				over 16 years ago
making the server location in the JFatCatClient optional	Andreas Prlic	More...				over 16 years ago
making field public	Andreas Prlic	More...				over 16 years ago
small warning cleanup	Andreas Prlic	More...				over 16 years ago
adding support for loading jFatCat, if it is in the classPath	Andreas Prlic	More...				over 16 years ago
adding a new test to make sure the new SEC residues won;t break structure alignment things	Andreas Prlic	More...				over 16 years ago
adding a new test to make sure the new SEC residues won;t break structure alignment things	Andreas Prlic	More...				over 16 years ago
Updating changes for FastaReader to support marking the current index position in the stream to allow for sequence proxy in a file. The new features haven't been tested yet.	Scooter Willis	More...				over 16 years ago
Committing in but now sure how this is going to work atmo. Need more time to think	Andy Yates	More...				over 16 years ago

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