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Analyzed 1 day ago. based on code collected 1 day ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Feb 12, 2025 — Feb 12, 2026 Showing page 7 of 136 Search / Filter on:
Changed the default mpileup options	Petr Danecek	More...				almost 14 years ago
Merge branch 'develop' of /software/vertres/git/origin/vr-codebase into develop	Petr Danecek	More...				almost 14 years ago
New stats for vcf-compare and remove . from non-empty ALT	Petr Danecek	More...				almost 14 years ago
merged	andrewjpage	More...				almost 14 years ago
create file and write a header even if no vcf records	Chris joyce	More...				almost 14 years ago
Use print_header switch in Vcf->new with region	Petr Danecek	More...				almost 14 years ago
Merge pull request #82 from CraigPorter/update-mapping-report	CraigPorter	More...				almost 14 years ago
Added standard deviation on depth of coverage to mapping reports.	Craig Porter	More...				almost 14 years ago
Merge branch 'develop' of /software/vertres/git/origin/vr-codebase into develop	Petr Danecek	More...				almost 14 years ago
Initial release of vcf-consensus and vcf-indel-stats	Petr Danecek	More...				almost 14 years ago
Merge branch 'develop' of /software/vertres/git/origin/vr-codebase into develop	Chris joyce	More...				almost 14 years ago
add status update functionality	Chris joyce	More...				almost 14 years ago
Merge branch 'develop' of /software/vertres/git/origin/vr-codebase into develop	Sendu Bala	More...				almost 14 years ago
moved the implementation of VertRes::Utils::Hierarchy methods lane_info(), lane_hierarchy_objects(), hierarchy_coverage() and get_lanes() into VRTrack::VRTrack, so that these methods can be used without a VertRes dependency	Sendu Bala	More...				almost 14 years ago
Merge branch 'develop' of /software/vertres/git/origin/vr-codebase into develop	Thomas Keane	More...				almost 14 years ago
modified rmdup column to be percent of reads mapped that are duplicates	Thomas Keane	More...				almost 14 years ago
moved functionality of VertRes::Utils::VRTrackFactory into VRTrack::Factory, letting you instantiate a VRTrack db without VertRes modules dependencies	Sendu Bala	More...				almost 14 years ago
Merge pull request #81 from CraigPorter/std_deviation	CraigPorter	More...				almost 14 years ago
changed rmdup to be reads rather than bases %	Thomas Keane	More...				almost 14 years ago
Merge branch 'develop' of /software/vertres/git/origin/vr-codebase into develop	Chris joyce	More...				almost 14 years ago
lane status filter	Chris joyce	More...				almost 14 years ago
modify image sizes	Chris joyce	More...				almost 14 years ago
specific database order	Chris joyce	More...				almost 14 years ago
add CSS	Chris joyce	More...				almost 14 years ago
switch umask to 002 to update the checkouts, then back to 007	Sendu Bala	More...				almost 14 years ago
changed umask to 007 - not sure if it was safe to just remove the umask setting, since vertres is not the last profile to be sourced	Sendu Bala	More...				almost 14 years ago
The PS tag description to FORMAT, not to INFO	Petr Danecek	More...				almost 14 years ago
Add PQ tag description into the header	Petr Danecek	More...				almost 14 years ago
Better file names with -p directories	Petr Danecek	More...				almost 14 years ago
Merge branch 'develop' of /software/vertres/git/origin/vr-codebase into develop	Petr Danecek	More...				almost 14 years ago

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