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Analyzed 1 day ago. based on code collected 1 day ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Feb 05, 2025 — Feb 05, 2026 Showing page 4 of 136 Search / Filter on:
slightly better name for last column	Sendu Bala	More...				over 13 years ago
added some help text to clarify meaning of last 3 columns	Sendu Bala	More...				over 13 years ago
minor formatting changes	Chris joyce	More...				over 13 years ago
Merge branch 'develop' of /software/vertres/git/origin/vr-codebase into develop	Chris joyce	More...				over 13 years ago
changed mapped col from mapstats->raw_bases() to mapstats->bases_mapped()	Chris joyce	More...				over 13 years ago
Modified Breakdancer bam2cfg.pl to include more statistics for calculation of SD cutoff value; density.R file is required	Kim Wong	More...				over 13 years ago
Merge pull request #96 from andrewjpage/assembly_pipeline_external_data	andrewjpage	More...				over 13 years ago
filenames as array ref	andrewjpage	More...				over 13 years ago
Merge pull request #95 from andrewjpage/assembly_pipeline_external_data	andrewjpage	More...				over 13 years ago
filenames as array ref	andrewjpage	More...				over 13 years ago
Merge pull request #94 from andrewjpage/assembly_pipeline_external_data	andrewjpage	More...				over 13 years ago
use correct filename varable	andrewjpage	More...				over 13 years ago
Merge branch 'develop' of /software/vertres/git/origin/vr-codebase into develop	Petr Danecek	More...				over 13 years ago
Run VQSR separately for SNPs and indels	Petr Danecek	More...				over 13 years ago
Merge pull request #93 from andrewjpage/assembly_pipeline_external_data	andrewjpage	More...				over 13 years ago
lookup filenames for assembly pipeline	andrewjpage	More...				over 13 years ago
Merge pull request #88 from andrewjpage/use_requested_fragment_size_in_bamcheck_qc	andrewjpage	More...				over 13 years ago
Merge pull request #89 from CraigPorter/update_mapping_report_tests	andrewjpage	More...				over 13 years ago
Merge pull request #90 from andrewjpage/croucher_protocol_rna_seq_csv_header	andrewjpage	More...				over 13 years ago
Merge pull request #91 from andrewjpage/bamcheck_after_mapping	andrewjpage	More...				over 13 years ago
Merge pull request #92 from andrewjpage/tweak_memory_requirements	andrewjpage	More...				over 13 years ago
tweak memory requirements based onstats over last month	andrewjpage	More...				over 13 years ago
let -a option work when -c option not given	Shane McCarthy	More...				over 13 years ago
Lightweight script for calculating Ts/Tv ratio	Petr Danecek	More...				over 13 years ago
Merge branch 'develop' of /software/vertres/git/origin/vr-codebase into develop	Petr Danecek	More...				over 13 years ago
VQSR filtering	Petr Danecek	More...				over 13 years ago
uncommented print of html header	Sendu Bala	More...				over 13 years ago
now that it does more than output tsv, changing name	Sendu Bala	More...				over 13 years ago
added ability to output user-centric html for use in team meetings on mobile phones; changed command line options	Sendu Bala	More...				over 13 years ago
fixed bug where it could not parse tasks with complex notes	Sendu Bala	More...				over 13 years ago

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