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Analyzed about 3 hours ago. based on code collected about 3 hours ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Feb 22, 2025 — Feb 22, 2026 Showing page 31 of 136 Search / Filter on:
indel_genotyper name changed to somatic_indel_detector	Shane McCarthy	More...				over 14 years ago
Merge pull request #24 from andrewjpage/miseq	andrewjpage	More...				over 14 years ago
update schema version	andrewjpage	More...				over 14 years ago
database migration to support MiSeq	andrewjpage	More...				over 14 years ago
Merge branch 'develop' of /software/vertres/git/origin/vr-codebase into develop	Chris joyce	More...				over 14 years ago
fix to importing the run date from the bam header DT tag	Shane McCarthy	More...				over 14 years ago
Merge branch 'develop' of /software/vertres/git/origin/vr-codebase into develop	Chris joyce	More...				over 14 years ago
Merge pull request #33 from CraigPorter/single-end-qc-ii	pd3	More...				over 14 years ago
Merge pull request #23 from CraigPorter/single-end-qc-ii	CraigPorter	More...				over 14 years ago
Merge pull request #22 from CraigPorter/single-end-qc	CraigPorter	More...				over 14 years ago
Detect single-ended files using 'is paired' flag for plot-bamcheck.	Craig Porter	More...				over 14 years ago
Revert "Changed method for detecting single-ended files for plot-bamcheck."	Craig Porter	More...				over 14 years ago
Fix for column descriptions not being recognised as present	Jim Stalker	More...				over 14 years ago
Print a warning in case DONT_FIX_VCF40_AG_TAGS is recommended.	Petr Danecek	More...				over 14 years ago
Turn on/off AG tags fix for VCFv4.0 by setting DONT_FIX_VCF40_AG_TAGS environment variable	Petr Danecek	More...				over 14 years ago
New -a option allows ignoring filtered sites	Petr Danecek	More...				over 14 years ago
Merge branch 'develop' of /software/vertres/git/origin/vr-codebase into develop	Petr Danecek	More...				over 14 years ago
Assume "INFO/tag" in description when only "tag" is given.	Petr Danecek	More...				over 14 years ago
enclose bam file names in quotes	andrewjpage	More...				over 14 years ago
config option for marking duplicates	andrewjpage	More...				over 14 years ago
initial mark duplicates	andrewjpage	More...				over 14 years ago
Merge branch 'develop' of /software/vertres/git/origin/vr-codebase into develop	Chris joyce	More...				over 14 years ago
Merge branch 'develop' of /software/vertres/git/origin/vr-codebase into develop	Jim Stalker	More...				over 14 years ago
Added distinct to get_mplex_pool_ids. Warehouse has started returning multiples of same pool id - this is defensive programming at work!	Jim Stalker	More...				over 14 years ago
Altering library file hierarchy to check for seq_tech	John Maslen	More...				over 14 years ago
Merge pull request #21 from CraigPorter/single-end-qc	CraigPorter	More...				over 14 years ago
Changed method for detecting single-ended files for plot-bamcheck.	Craig Porter	More...				over 14 years ago
Merge pull request #31 from CraigPorter/genome-cover	Sendu Bala	More...				over 14 years ago
Merge pull request #30 from CraigPorter/single-end	Sendu Bala	More...				over 14 years ago
Merge branch 'develop' of /software/vertres/git/origin/vr-codebase into develop	Jim Stalker	More...				over 14 years ago

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