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Analyzed 1 day ago. based on code collected 1 day ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Feb 19, 2025 — Feb 19, 2026 Showing page 30 of 136 Search / Filter on:
Improved description of assumed_sex config key	Petr Danecek	More...				over 14 years ago
pool files for assembly	andrewjpage	More...				over 14 years ago
Merge branch 'develop' of /software/vertres/git/origin/vr-codebase into develop	Petr Danecek	More...				over 14 years ago
Do not fail on files produced by older versions of bamcheck	Petr Danecek	More...				over 14 years ago
Collect number of MQ0 reads	Petr Danecek	More...				over 14 years ago
fix definition of a frozen release	Shane McCarthy	More...				over 14 years ago
Merge pull request #25 from andrewjpage/ignore_spiked_in_control	andrewjpage	More...				over 14 years ago
ignore_spiked_in_control	andrewjpage	More...				over 14 years ago
perfer the program name from the PN field if it exists	Shane McCarthy	More...				over 14 years ago
remove hardcoding of species	Chris joyce	More...				over 14 years ago
Determine chr naming from .fai file	Petr Danecek	More...				over 14 years ago
ns snps no indel protein predictions	Chris joyce	More...				over 14 years ago
Add vcf2consequences VEP postprocessor	Chris joyce	More...				over 14 years ago
Merge branch 'develop' of /software/vertres/git/origin/vr-codebase into develop	Shane McCarthy	More...				over 14 years ago
fix so that condolidate hierarchies works for the exome pipelines	Shane McCarthy	More...				over 14 years ago
Merge branch 'develop' of /software/vertres/git/origin/vr-codebase into develop	Petr Danecek	More...				over 14 years ago
New graphs and stats: acgt-cycles, mism-per-cycle	Petr Danecek	More...				over 14 years ago
More detailed output + print also positions of rejected positions	Petr Danecek	More...				over 14 years ago
Added option to not skip intergenic regions	Petr Danecek	More...				over 14 years ago
Fix in user-defined FILTER naming; $VCF and $RECORD now accessible in user filters	Petr Danecek	More...				over 14 years ago
Merge branch 'develop' of /software/vertres/git/origin/vr-codebase into develop	Shane McCarthy	More...				over 14 years ago
Merge branch 'feature/rolling-release' into develop	Shane McCarthy	More...				over 14 years ago
Runner script to do rolling releases	Shane McCarthy	More...				over 14 years ago
keep tranches file when doing cleanup	Shane McCarthy	More...				over 14 years ago
allow qc passed flag to trump gt not confirmed status	Shane McCarthy	More...				over 14 years ago
fixed bugs related to command_line in sam header, especially when there isnt one	Sendu Bala	More...				over 14 years ago
added some changes to look for already mapped samples	Thomas Keane	More...				over 14 years ago
create index file	andrewjpage	More...				over 14 years ago
initial check in of new mouse snp site	John Maslen	More...				over 14 years ago
fix ts_filter_level default	Shane McCarthy	More...				over 14 years ago

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