14
I Use This!
Moderate Activity

Commits : Listings

Analyzed 1 day ago. based on code collected 2 days ago.
Nov 05, 2025 — Nov 05, 2026
Commit Message Contributor Files Modified Lines Added Lines Removed Code Location Date
more generalization of different biological unit providers More... about 14 years ago
Major bug fix for dealing with rare biological assemblies, such as 4A1I bio assembly 2 More... about 14 years ago
Major bug fix for dealing with rare biological assemblies, such as 4A1I bio assembly 2 More... about 14 years ago
Major bug fix for dealing with rare biological assemblies, such as 4A1I bio assembly 2 More... about 14 years ago
transformations have higher precision... More... about 14 years ago
not showing chain ID for now More... about 14 years ago
fixing failing unit test More... about 14 years ago
improved comparisons between residueNumbers, as provided by Douglas More... about 14 years ago
making sure NMR structures with bio assemblies are dealt with correctly More... about 14 years ago
making sure NMR structures with bio assemblies are dealt with correctly More... about 14 years ago
new utility method to remove all models More... about 14 years ago
fixing a bug with resetting a counter More... about 14 years ago
adding new cif categories More... about 14 years ago
fix wrongly formatted groups names More... about 14 years ago
extending test to compare with access of flat file downloads More... about 14 years ago
now really returning the first bio assembly, rather than the asym unit More... about 14 years ago
docu update and changing access for some fields More... about 14 years ago
Fixed the compile error in Feature.java More... about 14 years ago
Removed the Log4j dependencies from the GFF3 parser. More... about 14 years ago
Added indexes into FeatureList and GFF3Reader classes. More... about 14 years ago
fix for unit test failures, use proper temp directory for test output files More... about 14 years ago
https://redmine.open-bio.org/issues/3364 representing nonstandard amino acids with X character. Also added a BioJava- style ProteinSequence entry point which gets converted to the FastaSequence that is used internally in the protein-disorder module More... about 14 years ago
fixing family ID More... about 14 years ago
disable remote scop testing for now More... about 14 years ago
fixing confusion between family and superfamily level More... about 14 years ago
fixing a confusion between family and superfamily levels More... about 14 years ago
fixing a confusion between family and superfamily levels More... about 14 years ago
workaround for a problem that seems openjdk specific More... over 14 years ago
adding javadoc More... over 14 years ago
PDBWW-4789 entityView is now linked to structure summary page! More... over 14 years ago