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Analyzed 1 day ago. based on code collected 2 days ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Nov 05, 2025 — Nov 05, 2026 Showing page 157 of 243 Search / Filter on:
Have ChemCompConsumer respond to newChemCompAtom	ulyssecarion	More...				about 13 years ago
Add ChemCompAtoms to ChemComp	ulyssecarion	More...				about 13 years ago
Merge pull request #45 from ulyssecarion/heavy-water	Andreas Prlic	More...				about 13 years ago
Consider Deuterium and Tritium not to be heavy elements by Element#isHeavyAtom	ulyssecarion	More...				about 13 years ago
Merge branch 'master' of github.com:biojava/biojava	Andreas Prlic	More...				about 13 years ago
Merge pull request #39 from ulyssecarion/bond-efficiency	Andreas Prlic	More...				about 13 years ago
Merge pull request #44 from karlnicholas/master	Andreas Prlic	More...				about 13 years ago
Added GenbankCookbookTest test case.	Karl Nicholas	More...				about 13 years ago
#31 adding a junit test	Andreas Prlic	More...				about 13 years ago
fixing missing bracket	Andreas Prlic	More...				about 13 years ago
#31 adding support for synthetic constructs via EntitySrcSyn	Andreas Prlic	More...				about 13 years ago
#31 starting to work on parsing organism and expression system	Andreas Prlic	More...				about 13 years ago
#31 starting to work on parsing organism and expression system	Andreas Prlic	More...				about 13 years ago
Add human-friendly toStrings for SSBond and LinkRecord	ulyssecarion	More...				about 13 years ago
Do not fail "silently" on error while PDB parsing	ulyssecarion	More...				about 13 years ago
Make more precise error reporting on bond-formation errors	ulyssecarion	More...				about 13 years ago
Skip sequence residues that aren't amino acids or are missing atoms for intra-residue bonds	ulyssecarion	More...				about 13 years ago
Bugfix: off-by-one error in the SSBOND handler	ulyssecarion	More...				about 13 years ago
Bugfix: getAltLocGroup might need to return 'this'	ulyssecarion	More...				about 13 years ago
Add tests for IDs that make formBonds crash	ulyssecarion	More...				about 13 years ago
Merge branch 'bond-efficiency' of https://github.com/ulyssecarion/biojava into ulyssecarion-bond-efficiency	Andreas Prlic	More...				about 13 years ago
Merge branch 'master' of https://github.com/karlnicholas/biojava into karl	Andreas Prlic	More...				about 13 years ago
Merge branch 'master' of github.com:biojava/biojava	Andreas Prlic	More...				about 13 years ago
Fixed bug created in SequenceFile when converted to BufferedReader from DataInput.	Karl Nicholas	More...				about 13 years ago
Merge remote-tracking branch 'updates/master'	Karl Nicholas	More...				about 13 years ago
More work on Genbank files, bringing them inline with interfaces. Renamed FastaHeaderParserInterface to SequenceHeaderParserInterface. Changed SequenceParserInterface to use BufferedReader instead of DataInput to provide flexibility for GenbankParser. Updated SequenceFileProxyLoader to BufferedReader.	Karl Nicholas	More...				about 13 years ago
Added GenbankParser and changed other Genbank code to use it.	Karl Nicholas	More...				about 13 years ago
Merge pull request #40 from dmyersturnbull/master	Douglas Myers-Turnbull	More...				about 13 years ago
Missed Andreas's recent changes.	dmyersturnbull	More...				about 13 years ago
Ran more conservative cleanup on AtomCache.	dmyersturnbull	More...				about 13 years ago

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