| Merge branch 'master' of https://github.com/dmyersturnbull/biojava.git |
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almost 13 years ago
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| Merge pull request #10 from biojava/master |
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almost 13 years ago
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| small cleanup |
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almost 13 years ago
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| Merge branch 'master' of https://github.com/biojava/biojava |
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almost 13 years ago
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| Working on issue #81. Created StructureFactory as a utility to handle retrieval of arbitrary structural identifiers. |
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almost 13 years ago
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| To make more consistent with ScopFactory, renamed getCath and setCath to getCathDatabase and setCathDatabase, respectively. |
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almost 13 years ago
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| Working on issue #81. Created CathFactory, which behaves like ScopFactory. Added setCathVersion() setter to CathInstallation. Made related changes in AtomCache. |
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almost 13 years ago
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| Fixed a serious caching bug in the recent modifications to BerkeleyScopInstallation. |
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almost 13 years ago
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| Fixed a bug in ScopFactory: as per the comment, forceLocalData should be true by default. Also made DEFAULT_VERSION public. |
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almost 13 years ago
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| Added getFailedLines() to Astral. |
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almost 13 years ago
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| cleanup |
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almost 13 years ago
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| removing external dependency on log4j |
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almost 13 years ago
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| Merge pull request #9 from biojava/master |
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almost 13 years ago
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| Merge pull request #80 from emckee2006/master |
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almost 13 years ago
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| Merge pull request #8 from biojava/master |
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almost 13 years ago
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| Update method comment to indicate legal calling sequences for using attribute features. |
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almost 13 years ago
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| Add a test case based on Daniel Cameron's example of failing FeatureList code. Modified FeatureList code to properly support adding indices both before and after adding features. Adding indicies between adds of features are still not supported. Ensure both adding index before features and adding features before index are both tested. |
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almost 13 years ago
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| Merge pull request #79 from pwrose/master |
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almost 13 years ago
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| Merge pull request #7 from biojava/master |
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almost 13 years ago
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| Merge branch 'master' of https://github.com/biojava/biojava.git |
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almost 13 years ago
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| Test commit |
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almost 13 years ago
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| Merge branch 'master' of https://github.com/biojava/biojava |
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almost 13 years ago
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| Merge branch 'master' of https://github.com/biojava/biojava |
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almost 13 years ago
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| Removing ScopDatabase from AtomCache |
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almost 13 years ago
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| RotationAxis: better handling of translational movements |
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almost 13 years ago
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| Cleanup and minor bug fixes |
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almost 13 years ago
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| Initialize list of bonds lazily. The bond list in an Atom is now initialized with Collections.emptyList(), rather than an ArrayList. This doubles the speed of allocating Atoms, since the bond list is not created. |
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almost 13 years ago
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| Merge branch 'master' of https://github.com/biojava/biojava |
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almost 13 years ago
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| Checking for empty SCOP files |
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almost 13 years ago
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| Merge branch 'master' of https://github.com/biojava/biojava |
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almost 13 years ago
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