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Analyzed 1 day ago. based on code collected 2 days ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Nov 05, 2025 — Nov 05, 2026 Showing page 146 of 243 Search / Filter on:
resolving merge conflict	Andreas Prlic	More...				over 12 years ago
Merge branch 'master' of github.com:andreasprlic/biojava	Andreas Prlic	More...				over 12 years ago
slowing down rate of requests to Uniprot server	Andreas Prlic	More...				over 12 years ago
fixing problem when displaying IDs of different length	Andreas Prlic	More...				over 12 years ago
Merge pull request #16 from biojava/master	emckee2006	More...				over 12 years ago
Test is now completely silent	Jose Manuel Duarte	More...				over 12 years ago
Improving TestAltLocs and fixing issue with SiftsChainToUniprotMapping - now TestAltLocs will test 3PIU with both pdb and cif parsers, before it depended whether the AtomCache was initialised to one or the other type of file so result was a bit unpredictable - SiftsChainToUniprotMapping was not downloading the sifts file and simply reading a blank file. This was making the corresponding test fail if run stand-alone (not if run as part of a full mvn intall, in that case the file was getting downloaded by a previous test)	Jose Manuel Duarte	More...				over 12 years ago
Updating integration tests to latest structure commits	Jose Manuel Duarte	More...				over 12 years ago
Merge remote-tracking branch 'main/master'	sbliven as Spencer Bliven	More...				over 12 years ago
Minor bug fixes	sbliven as Spencer Bliven	More...				over 12 years ago
Expanding ~ in StructureTools.getStructure paths	sbliven as Spencer Bliven	More...				over 12 years ago
Reducing verbosity of test, switch to full output setting VERBOSE=true	Jose Manuel Duarte	More...				over 12 years ago
Added test for crystal info and some small fixes	Jose Manuel Duarte	More...				over 12 years ago
Using reflection for all class names in mmcif parser	Jose Manuel Duarte	More...				over 12 years ago
Missing class in last commit	Jose Manuel Duarte	More...				over 12 years ago
Implemented full treatment of xtal info and experimental technique - some reshuffling of fields in PDBHeader and PDBCrystallographicInfo - now xtal info is parsed from both PDB and mmCIF (before only from PDB) - remove deprecated method getHeader/setHeader in Structure - some additions to the Structure interface e.g. isCrystallographic - StructureImpl.isNmr() is reimplemented to strictly signal NMR structures (as the docs say), use nrModels() for multimodels - a few deprecations	Jose Manuel Duarte	More...				over 12 years ago
#48 altlocs are now getting rotated for display	Andreas Prlic	More...				over 12 years ago
Test	pwrose	More...				over 12 years ago
fixing #99	Andreas Prlic	More...				over 12 years ago
resolving #100	Andreas Prlic	More...				over 12 years ago
Merge pull request #98 from sbliven/master	sbliven as Spencer Bliven	More...				over 12 years ago
Fixing compilation bug.	sbliven as Spencer Bliven	More...				over 12 years ago
Merge pull request #97 from pwrose/master	pwrose	More...				over 12 years ago
Factored out code that makes polymer and intra-group bonds into its own class so it can be reused by the mmCIF parser. Added code to create polymer bonds in nucleotides.Added support for _struct_conn records in mmCIF files.	pwrose	More...				over 12 years ago
Reducing jmol output	sbliven as Spencer Bliven	More...				over 12 years ago
Merge pull request #95 from josemduarte/master	sbliven as Spencer Bliven	More...				over 12 years ago
Merge pull request #96 from pwrose/master	pwrose	More...				over 12 years ago
Added Java Bean for mmcif category _struct_conn	pwrose	More...				over 12 years ago
Merge branch 'master' of https://github.com/biojava/biojava	Jose Manuel Duarte	More...				over 12 years ago
Full implementation of ASA calculation including a unit test	Jose Manuel Duarte	More...				over 12 years ago

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