UFC (Unified Form-assembly Code) is a unified framework for finite element assembly. More precisely, it defines a fixed interface for communicating low level routines (functions) for evaluating and assembling finite element variational forms. The UFC interface consists of a single header file ufc.h
... [More] that specifies a C++ interface that must be implemented by code that complies with the UFC specification. [Less]
The intention of this project is to support users of Randall Hyde's HLA (High Level Assembly) language who wish to maintain, extend, or evolve the HLA Standard Library. http://webster.cs.ucr.edu/AsmTools/HLA/index.html
Ray assembler
Ray is a parallel de novo genome assembler that utilises the message-passing interface everywhere and is implemented using peer-to-peer communication.
Ray is implemented using the Ray Platform, a message-passing-interface programming framework.
Ray is documented in
... [More]
Documentation/ (many files)
MANUAL_PAGE.txt (command-line options, same as Ray -help)
README.md (general)
INSTALL.txt (quick installation)
Solutions (all bundled in a single Product called Ray)
de novo genome assembly (original Ray Technology, re-branded to géno-Ray Technology)
quantification of contig abundance (con-Ray Technology)
de novo transcriptome assembly (trans-Ray Technology)
quantification of transcript expression (express-Ray Technology)
de novo meta-genome assembly (méta-Ray Technology)
quantificati [Less]
Hybrid is a kernel being developed with an emphasis on design and portability. It is largely implemented in C/C++, with a small amount of assembly. The kernel is built on top of elklib.
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