The Ray Parallel Genome Assembler

I Use This!

Inactive

Analyzed 1 day ago. based on code collected 1 day ago.

Project Summary

Ray assembler
Ray is a parallel de novo genome assembler that utilises the message-passing interface everywhere and is implemented using peer-to-peer communication.

Ray is implemented using the Ray Platform, a message-passing-interface programming framework.

Ray is documented in

Documentation/ (many files)
MANUAL_PAGE.txt (command-line options, same as Ray -help)
README.md (general)
INSTALL.txt (quick installation)
Solutions (all bundled in a single Product called Ray)
de novo genome assembly (original Ray Technology, re-branded to géno-Ray Technology)
quantification of contig abundance (con-Ray Technology)
de novo transcriptome assembly (trans-Ray Technology)
quantification of transcript expression (express-Ray Technology)
de novo meta-genome assembly (méta-Ray Technology)
quantificati

In a Nutshell, The Ray Parallel Genome Assembler...

...
has had 2,688 commits made by 12 contributors
representing 41,241 lines of code
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is mostly written in C++
with an average number of source code comments
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has a well established, mature codebase
maintained by nobody
with stable Y-O-Y commits
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took an estimated 10 years of effort (COCOMO model)
starting with its first commit in January, 2010
ending with its most recent commit about 8 years ago

Quick Reference

Project Links:

Homepage
Download

Code Locations:

https://github.com/sebhtml/ray

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Managers:

Sébastien Boisvert

Licenses

GNU General Public License v3.0 only

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These details are provided for information only. No information here is legal advice and should not be used as such.

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Project Security

Vulnerabilities per Version ( last 10 releases )

There are no reported vulnerabilities

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