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Analyzed about 22 hours ago. based on code collected about 23 hours ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Jan 22, 2025 — Jan 22, 2026 Showing page 124 of 136 Search / Filter on:
new read_group arg for do_mapping	sb10	More...				over 16 years ago
fixed flag bug in cigar_to_sam: can not be paired properly if the mate is unmapped!	sb10	More...				over 16 years ago
fixed bug that was outputting _1 read details instead of _2 read details in cigar_to_sam	sb10	More...				over 16 years ago
[no comment]	tk2	More...				over 16 years ago
removed extraneous tab before RG tag	sb10	More...				over 16 years ago
removed temp debugging lines	sb10	More...				over 16 years ago
fixed another cigar_to_sam bug so that it can now fully copy with filtered fastq files	sb10	More...				over 16 years ago
improved do_mapping to only create output file on checked success and to not repeat mapping if already done	sb10	More...				over 16 years ago
put in -L option	tk2	More...				over 16 years ago
put in -L option	tk2	More...				over 16 years ago
Bumped SCHEMA_VERSION to 2	jstalker	More...				over 16 years ago
[no comment]	tk2	More...				over 16 years ago
[no comment]	tk2	More...				over 16 years ago
[no comment]	tk2	More...				over 16 years ago
[no comment]	tk2	More...				over 16 years ago
avoid a double read_name change when allowing pair name differences in cigar_to_sam()	sb10	More...				over 16 years ago
[no comment]	tk2	More...				over 16 years ago
trivial comment changes	sb10	More...				over 16 years ago
first working version of release pipeline; so far only makes release hierarchy and merges from lane to sample	sb10	More...				over 16 years ago
Version 1 of the VRTrack API	jstalker	More...				over 16 years ago
added explantory comment	sb10	More...				over 16 years ago
added option to parse_fofn() to make paths relative	sb10	More...				over 16 years ago
added trival warning to POD	sb10	More...				over 16 years ago
do not mkdir() if the directory already exists	sb10	More...				over 16 years ago
provide bsub_opts for merge_and_stat mapping action	sb10	More...				over 16 years ago
reimplmented cigar_to_sam() to handle reads not being present in one of the two fastq files	sb10	More...				over 16 years ago
new fastq parser	sb10	More...				over 16 years ago
[no comment]	tk2	More...				over 16 years ago
[no comment]	tk2	More...				over 16 years ago
[no comment]	pd3	More...				over 16 years ago

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