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Analyzed 1 day ago. based on code collected 1 day ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Feb 07, 2025 — Feb 07, 2026 Showing page 12 of 136 Search / Filter on:
Chunk specific options	Petr Danecek	More...				almost 14 years ago
Merge pull request #70 from andrewjpage/max_compression	andrewjpage	More...				almost 14 years ago
use minus 9 for compressing fastqs	andrewjpage	More...				almost 14 years ago
Update rbuf size when the sequence length is increased	Petr Danecek	More...				almost 14 years ago
Skip broken bjob runs	Petr Danecek	More...				almost 14 years ago
Merge pull request #69 from andrewjpage/increase_bamcheck_read_length	andrewjpage	More...				almost 14 years ago
increase bamcheck read length to work with long miseq reads	andrewjpage	More...				almost 14 years ago
Merge pull request #68 from andrewjpage/import_handle_file_exists_on_db_update	andrewjpage	More...				almost 14 years ago
declare variables	andrewjpage	More...				almost 14 years ago
Merge pull request #67 from andrewjpage/import_handle_file_exists_on_db_update	andrewjpage	More...				almost 14 years ago
if a file exists dont let import faile	andrewjpage	More...				almost 14 years ago
Merge pull request #66 from andrewjpage/tophat_temp_directories	andrewjpage	More...				almost 14 years ago
set scope of directories var	andrewjpage	More...				almost 14 years ago
run tophat in a temp directory because when multiple splits are run symultaneously it overwrites intermediate files	andrewjpage	More...				almost 14 years ago
Merge branch 'develop' of /software/vertres/git/origin/vr-codebase into develop	Petr Danecek	More...				almost 14 years ago
Determining Status and Queue: Do not get discouraged by missing spaces	Petr Danecek	More...				almost 14 years ago
Merge pull request #65 from CraigPorter/pipeline	CraigPorter	More...				almost 14 years ago
Set Import_iRODS_fastq campress_and_validate script to reserve 100Mb.	Craig Porter	More...				almost 14 years ago
Merge pull request #64 from CraigPorter/pipeline	CraigPorter	More...				almost 14 years ago
Merge pull request #63 from andrewjpage/single_ended_tophat	andrewjpage	More...				almost 14 years ago
single ended parameters	andrewjpage	More...				almost 14 years ago
Merge pull request #62 from andrewjpage/tophat	andrewjpage	More...				almost 14 years ago
Merge branch 'develop' of /software/vertres/git/origin/vr-codebase into develop	Chris joyce	More...				almost 14 years ago
new version 2.4	Chris joyce	More...				almost 14 years ago
Set Import_iRODS_fastq pipeline's compress_and_validate script to reserve 50Mb of memory.	Craig Porter	More...				almost 14 years ago
allow for the total reads check to be turned off for different mappers	andrewjpage	More...				almost 14 years ago
create a fastq check file if it doesnt exist already	andrewjpage	More...				almost 14 years ago
Merge branch 'develop' of /software/vertres/git/origin/vr-codebase into develop	Petr Danecek	More...				almost 14 years ago
Changed the default samtools/bcftools binary	Petr Danecek	More...				almost 14 years ago
fix tophat tests	andrewjpage	More...				almost 14 years ago

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