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Analyzed about 22 hours ago. based on code collected about 22 hours ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Jun 04, 2024 — Jun 04, 2025 Showing page 20 of 86 Search / Filter on:
Add methods for reading alignment results from an ALIB.	Seth Just	More...				almost 3 years ago
Clean up command line parsing of alternative workflow flags.	Seth Just	More...				almost 3 years ago
Implement more complete tests for new operation modes.	Seth Just	More...				almost 3 years ago
Small cleanup and refactoring for new quant-only mode. Relax utility type bounds for simplicity.	Seth Just	More...				almost 3 years ago
Very slightly relax the regression check assertion on peptide count so near-equal values don't trigger failure of the inequality.	Seth Just	More...				almost 3 years ago
Fix up Percolator version mismatch in EncyclopediaEndToEndIT; this was again caused by previous inconsistencies in the Percolator version default.	Seth Just	More...				almost 3 years ago
Fix up XCorDIAEndToEndIT to pass; the regression was caused by an unrelated fix to inconsistently defined defaults.	Seth Just	More...				almost 3 years ago
Clean up ALIB writing and stub out necessary method for generating entries.	Seth Just	More...				almost 3 years ago
Fix up setup issue in SearchToBLIBIT. Skip test in some cases. Add TODO.	Seth Just	More...				almost 3 years ago
Fix compilation to allow running tests.	Seth Just	More...				almost 3 years ago
Merge branch 'master' of bitbucket.org:searleb/encyclopedia	Brian Searle	More...				almost 3 years ago
made modification to the peptide visualizer to add precursor data in	Brian Searle	More...				almost 3 years ago
Merge branch 'master' of bitbucket.org:searleb/encyclopedia	Brian Searle	More...				almost 3 years ago
added more testing quant code, added a small regression dataset	Brian Searle	More...				almost 3 years ago
Stub out new -alignmentFrom argument and output converter.	Seth Just	More...				almost 3 years ago
Small refactoring of method parameters.	Seth Just	More...				almost 3 years ago
Factor out duplicated code between the two methods implementing ELIB flavors.	Seth Just	More...				almost 3 years ago
Support DIA-NN-flavored CSV libraries.	Seth Just	More...				almost 3 years ago
Some fleshing out of tests for the new alignment-only format.	Seth Just	More...				almost 3 years ago
Initial implementation of alignment-only library writing.	Seth Just	More...				almost 3 years ago
Clean up argument parsing. Add ITs for new format.	Seth Just	More...				almost 3 years ago
Log new CLI argument.	Seth Just	More...				almost 3 years ago
Implement new CLI argument, stubbed OutputFormat for alignment-only library.	Seth Just	More...				almost 3 years ago
Create an enum for library output formats	Seth Just	More...				almost 3 years ago
Address small temp file leak in readability check.	Seth Just	More...				almost 3 years ago
Merge branch 'master' of bitbucket.org:searleb/encyclopedia	Brian Searle	More...				almost 3 years ago
small update to ordered cache, still needs work	Brian Searle	More...				almost 3 years ago
Merge branch 'master' of bitbucket.org:searleb/encyclopedia	Brian Searle	More...				almost 3 years ago
added error messages to table reading	Brian Searle	More...				almost 3 years ago
started work on a quantitation test	Brian Searle	More...				almost 3 years ago

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