| added message about memory |
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over 9 years ago
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| added maven pom to create executable jars |
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over 9 years ago
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| cleaned up warnings |
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over 9 years ago
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| added command line parsing to pecanpie |
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over 9 years ago
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| added percolator into pecanpie |
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over 9 years ago
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| fixed broken test |
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over 9 years ago
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| added percolator analysis capability, need to plug it in to pecanpie |
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over 9 years ago
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| added percolator executable, still some threading issues with ExternalExecutor |
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over 9 years ago
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| added command line parsing code |
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over 9 years ago
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| added command line parsing, clean up of loading |
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over 9 years ago
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| added printing interface |
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over 9 years ago
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| moved results writing to a separate thread |
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over 9 years ago
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| multithreaded writing DIA files |
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over 9 years ago
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| continued refactoring to isolate pecan 1 code |
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over 9 years ago
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| major refactor to extract out pecan specific code |
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over 9 years ago
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| added pecanpie script |
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over 9 years ago
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| finished basic pecan, need to flush out alternate scores for percolator |
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over 9 years ago
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| fixed peakpicking to match Sonia 99% of the time |
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over 9 years ago
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| created trace plotting like skyline to test for bugs |
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over 9 years ago
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| added auxillary scoring |
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over 9 years ago
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| fixed broken test |
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over 9 years ago
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| major refactor to remove static amino acid mass constants |
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over 9 years ago
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| finalized first round of Pecan Scoring |
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over 9 years ago
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| fixed major bug writing/extracting peak arrays from DIA files. Older DIA files are obsolete now |
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over 9 years ago
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| added some new scores |
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over 9 years ago
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| added fixme notes for unfinished tasks |
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over 9 years ago
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| changed swath to stripe to avoid trademark issues, added isotope distribution |
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over 9 years ago
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| added graphing, background calculation, and basic pecan scoring |
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over 9 years ago
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| changed fasta to match sonia, added pecan fragmentation system |
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over 9 years ago
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| added pecan background generator |
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over 9 years ago
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