| fixed various bugs, modified some of the scoring features to be more useful |
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over 9 years ago
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| added graphical tool to investigate feature distributions for pecan and encyclopedia |
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over 9 years ago
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| fixed broken tests |
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over 9 years ago
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| added prophet-like retention time alignment. Works great |
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over 9 years ago
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| added additional digestion enzymes |
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over 9 years ago
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| minor fixes to dia browser |
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over 9 years ago
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| extra retention time tests, still needs work |
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over 9 years ago
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| added irtdb to blib parsing |
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over 9 years ago
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| fixed bug in retention time analysis |
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over 9 years ago
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| added intermediate percolator parsing |
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over 9 years ago
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| started to add RT filtering, compiles but needs work before sucessful filtering |
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over 9 years ago
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| added RT calibration, also added incomplete percolator XML processing |
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over 9 years ago
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| fixed various bugs in deconvolution |
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over 9 years ago
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| added junky DIA browser, needs a lot of work |
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over 9 years ago
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| added XTandem scoring, seems very effective |
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over 9 years ago
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| added library search ability, needs testing |
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over 9 years ago
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| added MSP reader for NIST libraries |
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over 9 years ago
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| flushed out library scoring |
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over 9 years ago
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| not much |
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over 9 years ago
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| added library searching scoring, not complete |
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over 9 years ago
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| major refactor, wrote stub for library search |
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over 9 years ago
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| added target fasta to gui |
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over 9 years ago
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| fixed bugs in overlap deconvolution |
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over 9 years ago
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| fixed parent selection for demux, need to write gui to investigate why overlap is so high |
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over 9 years ago
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| added println checks for deconvolution bug, bug still present |
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over 9 years ago
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| added overlap deconvolution option to GUI |
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over 9 years ago
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| added overlap deconvolution |
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over 9 years ago
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| added skeleton for deconvolution |
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over 9 years ago
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| added various gui cleanups |
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over 9 years ago
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| cleaned up help |
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over 9 years ago
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