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Analyzed about 9 hours ago. based on code collected 1 day ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Nov 06, 2025 — Nov 06, 2026 Showing page 62 of 243 Search / Filter on:
The fix to the insertion code issue to is use the ResidueNumber object as the hash key instead of a string made from the residue number. Fixes bug where structures with insertion codes were likely to have incorrect secondary structure assignments.	Matt Larson	More...				almost 10 years ago
Merge pull request #625 from lafita/master	Andreas Prlic	More...				almost 10 years ago
Update README with full BioJava logo	Aleix Lafita	More...				almost 10 years ago
Add full name BioJava logo	Aleix Lafita	More...				almost 10 years ago
adding new size method to CCD, as an easy count for the nr. of ChemComps.	Andreas Prlic	More...				almost 10 years ago
and another shortcut for lpeptidelinking	Andreas Prlic	More...				almost 10 years ago
adding similar lookup table to ResidueType	Andreas Prlic	More...				almost 10 years ago
now without (or few) loops	Andreas Prlic	More...				almost 10 years ago
removing string quotation characters should not happen at this place.	Andreas Prlic	More...				almost 10 years ago
Merge branch 'master' of github.com:biojava/biojava	Andreas Prlic	More...				almost 10 years ago
Merge pull request #619 from SofiaSilveira/master	Andreas Prlic	More...				almost 10 years ago
Merge pull request #620 from edlunde-dnastar/425_issue330	Matt Larson	More...				almost 10 years ago
Throw IAE if databaseName is locuslink; NCBI LocusLink is no longer supported	Michael Heuer as Michael L Heuer	More...				almost 10 years ago
Use HTTPS to access NCBI Entrez and QBLAST (#34)	Michael Heuer as Michael L Heuer	More...				almost 10 years ago
Issue 330: fixes for PDB Parser, * Handle short lines with CONECT, LINK * Restore bond building with LINK records * Add an exception handler around line handlers for more robust parsing when file format is violated.	Matt Larson	More...				almost 10 years ago
Feature evolution file	SofiaSilveira	More...				almost 10 years ago
Rename CHANGELOG to CHANGELOG.md	Andreas Prlic	More...				almost 10 years ago
Update CHANGELOG	Andreas Prlic	More...				almost 10 years ago
Update CHANGELOG	Andreas Prlic	More...				almost 10 years ago
[maven-release-plugin]prepare for next development iteration	Jenkins	More...				almost 10 years ago
[maven-release-plugin]prepare release biojava-4.2.5	Jenkins	More...				almost 10 years ago
Merge pull request #612 from andreasprlic/bugfixes-4.2	Jose Manuel Duarte	More...				almost 10 years ago
Merge pull request #611 from andreasprlic/phosphosite	Jose Manuel Duarte	More...				almost 10 years ago
Added exception handler for out-of-bounds errors when parsing lines, usually indicative of misformated lines. Added line length checks within the LINK and CONECT parsing blocks to allow for short lines to be parsed.	Matt Larson	More...				almost 10 years ago
addressing requested changes re. throwing exceptions.	Andreas Prlic	More...				almost 10 years ago
addressing requested changes re. throwing exceptions.	Andreas Prlic	More...				almost 10 years ago
moving to Java 7	Andreas Prlic	More...				almost 10 years ago
moving to Java 7	Andreas Prlic	More...				almost 10 years ago
now also accepting old header line	Andreas Prlic	More...				almost 10 years ago
now also accepting old header line	Andreas Prlic	More...				almost 10 years ago

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