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cool-apps-ganet

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The application will implement GALib and grow an "optimal" neural network of variable size to maximize memory capicity and minimize network size for any training set. For more information, try the "White Paper" document in the Documents and Files section.

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coolapps

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CoolApps

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e3d-for-sungrid

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E3D - 3D Elastic Seismic Wave Propagation Code, is capable of simulating seismic wave propagation in a 3D heterogeneous earth. This project aims at making E3D suitable to be run on Sun Grid.

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glimmerhmm

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GlimmerHMM is a new gene finder based on a Generalized Hidden Markov Model (GHMM). Although the gene finder conforms to the overall mathematical framework of a GHMM, additionally it incorporates splice site models adapted from the GeneSplicer program and a decision tree adapted from GlimmerM. It ... [More] also utilizes Interpolated Markov Models for the coding and noncoding models. [Less]

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mafft

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Porting MAFFT-5.861 to be used on Sun Grid. MAFFT is a multiple sequence alignment program.

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mfix

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MFIX (Multiphase Flow with Interphase eXchanges) is a general-purpose computer code developed at the National Energy Technology Laboratory (NETL) for describing the hydrodynamics, heat transfer and chemical reactions in fluid-solids systems. It has been used for describing bubbling and circulating ... [More] fluidized beds and spouted beds. MFIX calculations give transient data on the three-dimensional distribution of pressure, velocity, temperature, and species mass fractions. [Less]

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mpiplatform

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This Netbeans plugin supports developing and testing of MPI applications suited for SunGrid.

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nucleicacidbuilder

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NAB porting projects for Sun Grid

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parmetis

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ParMETIS is an MPI-based parallel library that implements a variety of algorithms for partitioning unstructured graphs, meshes, and for computing fill-reducing orderings of sparse matrices.

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parmgridgen

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SunGrid (network.com) version of ParMGridGen. ParMGridGen-1.0 is a highly optimized serial and parallel library for obtaining a sequence of successive coarse grids that are well suited for geometric multigrid methods. The quality of the elements of the coarse grids is optimized using a multilevel ... [More] framework. The parallel library is based on MPI and is portable to a wide range of architectures. [Less]

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