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alchemlyb

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  Analyzed about 11 hours ago

alchemlyb is makes alchemical free energy calculations easier to do by leveraging the full power and flexibility of the PyData stack. It includes: - Parsers for extracting raw data from output files of common molecular dynamics engines such as GROMACS, AMBER, or NAMD. - Subsamplers for obtaining ... [More] uncorrelated samples from timeseries data. - Estimators for obtaining free energies directly from this data, using best-practices approaches for multistate Bennett acceptance ratio (MBAR), BAR, and thermodynamic integration (TI). [Less]

6.39K lines of code

6 current contributors

3 months since last commit

1 users on Open Hub

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