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TopHat mapper

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Analyzed about 2 hours ago. based on code collected about 2 hours ago.

Project Summary

Spliced read mapper for RNA-Seq

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In a Nutshell, TopHat mapper...

...
has had 4,353 commits made by 25 contributors
representing 247,782 lines of code
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is mostly written in C++
with a very well-commented source code
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has a well established, mature codebase
maintained by nobody
with stable Y-O-Y commits
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took an estimated 64 years of effort (COCOMO model)
starting with its first commit in October, 2008
ending with its most recent commit over 7 years ago

Quick Reference

Code Locations:

https://github.com/infphilo/tophat

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Project Security

Vulnerabilities per Version ( last 10 releases )

There are no reported vulnerabilities

Project Vulnerability Report

Security Confidence Index

Poor security track-record

Favorable security track-record

Vulnerability Exposure Index

Many reported vulnerabilities

Few reported vulnerabilities

About Project Vulnerability Report

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About Project Security

Code

Lines of Code

Activity

Commits per Month

Community

Contributors per Month

Languages

C++	79%
HTML	8%
C	8%
11 Other	5%

30 Day Summary

Aug 21 2025 — Sep 20 2025

0 Commits
0 Contributors

12 Month Summary

Sep 20 2024 — Sep 20 2025

0 Commits
0 Contributors

Most Recent Contributors

	George Hartzell		Pierre Rossi
	Don Armstrong		Jeff Hussmann
	Geo Pertea		infphilo

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