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spades: genome assembler

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Analyzed 1 day ago. based on code collected 1 day ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Oct 13, 2024 — Oct 13, 2025 Showing page 6 of 402 Search / Filter on:
Fix invalid read in ValidHKmerGenrator and unbreak iontorrent tests	Anton Korobeynikov	More...				over 7 years ago
spades.py: explicitly specifying reads compressor (gzip or pigz)	Alexey Gurevich	More...				over 7 years ago
comments on potential meta simplif modifications	Sergey Nurk	More...				over 7 years ago
simplification cycle bounded	Sergey Nurk	More...				over 7 years ago
GF stats for assembly; CheckM for multi-bins	Yuri Gorshkov	More...				over 7 years ago
More review fixes	Yuri Gorshkov	More...				over 7 years ago
Unused parameter removed	Dmitry Antipov	More...				over 7 years ago
code duplication reduced	Dmitry Antipov	More...				over 7 years ago
no special self conj condition in meta	Sergey Nurk	More...				over 7 years ago
removed misleading LibraryPriotity, libs priority is set in the enum	Andrey Prjibelski	More...				over 7 years ago
slightly more debug in path extend	Andrey Prjibelski	More...				over 7 years ago
Silence more warnings	Anton Korobeynikov	More...				over 7 years ago
Silence a warning	Anton Korobeynikov	More...				over 7 years ago
Cleanup	Anton Korobeynikov	More...				over 7 years ago
Unbreak tests	Anton Korobeynikov	More...				over 7 years ago
Fix epic bug	Anton Korobeynikov	More...				over 7 years ago
Excessive mode check removed	Dmitry Antipov	More...				over 7 years ago
Review fixes	Yuri Gorshkov	More...				over 7 years ago
gzip subsampled reads	Yuri Gorshkov	More...				over 7 years ago
Python3 compatibility for cut_fastta	Yuri Gorshkov	More...				over 7 years ago
Decreased cutoff on edges length used for bwa mapping	Dmitry Antipov	More...				over 7 years ago
ignore merged reads during k-mer size estimation in rnaSPAdes	letovesnoi	More...				over 7 years ago
Unbreak	Yuri Gorshkov	More...				over 7 years ago
Merge branch 'markdown_manuals'	Andrey Prjibelski	More...				over 7 years ago
crusial fix in loop traversal pipeline	Andrey Prjibelski	More...				over 7 years ago
Revert graph construction change	Anton Korobeynikov	More...				over 7 years ago
Merge pull request #6 from ablab/paired_cov_filter	Anton Korobeynikov	More...				over 7 years ago
typos	Andrey Prjibelski	More...				over 7 years ago
table of contents, proper bold italics on github	Andrey Prjibelski	More...				over 7 years ago
markdown manual	Andrey Prjibelski	More...				over 7 years ago

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