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Commits : Listings

Analyzed 1 day ago. based on code collected 1 day ago.
Oct 02, 2025 — Oct 02, 2026
Commit Message Contributor Files Modified Lines Added Lines Removed Code Location Date
Relax the --barcode-name regex. (#2387) More... 3 days ago
Make phase and targetcut work with records where seq is '*' More... 6 days ago
Update values in embed_ref and multi_seq_per_slice options More... 10 days ago
Small tweak to checksum man page explaining release 1.24 versioning More... 12 days ago
Switch containers to ones built by samtools/c-maint More... 24 days ago
Fix --move-umi-to-tag More... 24 days ago
stats: grow the coverage ring buffer instead of wrapping around More... 26 days ago
Markdup Refactor (PR #2376) More... 30 days ago
Report failures in bam_translate() More... about 1 month ago
Use designators when initialising args. More... about 1 month ago
Fix memory leaks when samtools view CLI bails. More... about 1 month ago
Improve memory handling when building translation tables for merge More... about 2 months ago
Add error checking to bam_smpl_* functions More... about 2 months ago
Improve error checking in samtools phase More... about 2 months ago
Improve error reporting in samtools dict More... about 2 months ago
Improve checks around khash insertions More... about 2 months ago
Spelling corrections [minor] More... about 2 months ago
Check string aux tag types before accessing data More... about 2 months ago
Move checksum version to 2.0 More... about 2 months ago
Fix a stack-buffer-overflow when parsing mpileup -G RG.txt option More... about 2 months ago
Fix incorrect test data. More... about 2 months ago
Mpileup: check for alignments off the end of the reference More... about 2 months ago
Fix a buffer read-buffer overrun in pileup for RG:A:x More... about 2 months ago
Fix reuse-aftr-free in bam_plcmd ref cache More... about 2 months ago
Add --norc --noprofile to bash invocations in test.pl More... about 2 months ago
Remove the meme of strdup(optarg) in CLI parsing More... about 2 months ago
Add an adjustable version number. More... about 2 months ago
Merge additional CI targets (PR #2353) More... 2 months ago
Make samtools view --unmap and --unoutput work together More... 2 months ago
Strip UR tags from header SQ lines (#2357) More... 2 months ago