openhub.net
Black Duck Software, Inc.
Open Hub
Follow @
OH
Sign In
Join Now
Projects
People
Organizations
Tools
Blog
BDSA
Projects
People
Projects
Organizations
Forums
S
samtools
Settings
|
Report Duplicate
5
I Use This!
×
Login Required
Log in to Open Hub
Remember Me
Moderate Activity
Commits
: Listings
Analyzed
about 6 hours
ago. based on code collected
about 7 hours
ago.
Nov 29, 2024 — Nov 29, 2025
Showing page 6 of 94
Search / Filter on:
Commit Message
Contributor
Files Modified
Lines Added
Lines Removed
Code Location
Date
Updates to manpages.
Andrew Whitwham
More...
over 1 year ago
Make name sort put primary reads before secondary reads.
James Bonfield
More...
over 1 year ago
Update CRAM versions
Andrew Thrasher
More...
over 1 year ago
Add PG header tag to samtools import.
James Bonfield
More...
over 1 year ago
Speed up mpileup by reducing passes through arrays and qual (#1995)
James Bonfield
More...
over 1 year ago
Add region and section/part filtering to CRAM samtools cat.
James Bonfield
More...
almost 2 years ago
Make fastq -d tag:val work for multiple values
James Bonfield
More...
almost 2 years ago
Make consensus --min-depth work for Bayesian mode too
James Bonfield
More...
almost 2 years ago
Document order in which mpileup BAQ happens.
James Bonfield
More...
almost 2 years ago
Add more split on integer tag functional tests
Rob Davies
More...
almost 2 years ago
fix error message in faidx.c
Nick Moore
More...
almost 2 years ago
Add a check for file name validity in options. (#1981)
Andrew Whitwham
More...
almost 2 years ago
Majorly restructure fixmate.
James Bonfield
More...
almost 2 years ago
Add more format string tests
Rob Davies
More...
almost 2 years ago
Add mpileup --output-extra RLEN. (#1971)
James Bonfield
More...
almost 2 years ago
Refactor test_expand_format_string so it's easier to add new tests
Rob Davies
More...
almost 2 years ago
Change default max depth for bedcov. (#1970)
James Bonfield
More...
almost 2 years ago
Merge version number bump and NEWS.md file from master
Rob Davies
More...
almost 2 years ago
Release 1.19.2
Rob Davies
More...
almost 2 years ago
Add NEWS item
Rob Davies
More...
almost 2 years ago
Add unordered BED file test
Rob Davies
More...
almost 2 years ago
Fix inverted checks for failure of bed_index() and bed_index_core()
Rob Davies
More...
almost 2 years ago
Merge version number bump and NEWS.md file from master
Rob Davies
More...
almost 2 years ago
Release 1.19.1
Rob Davies
More...
almost 2 years ago
NEWS and copyright date updates (#1973)
daviesrob
More...
almost 2 years ago
Happy New Year (#1972)
daviesrob
More...
almost 2 years ago
Add split option to pad numeric values with zeros in file names
Rob Davies
More...
almost 2 years ago
Add a CRAM file size regression test
James Bonfield
More...
almost 2 years ago
Allow splitting by integer tag
Rob Davies
More...
almost 2 years ago
Add MPC to the samtools stats man page
James Bonfield
More...
almost 2 years ago
←
1
2
3
4
5
6
7
8
9
10
…
93
94
→
This site uses cookies to give you the best possible experience. By using the site, you consent to our use of cookies. For more information, please see our
Privacy Policy
Agree