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Moderate Activity

Commits : Listings

Analyzed about 6 hours ago. based on code collected about 7 hours ago.
Nov 29, 2024 — Nov 29, 2025
Commit Message Contributor Files Modified Lines Added Lines Removed Code Location Date
Updates to manpages. More... over 1 year ago
Make name sort put primary reads before secondary reads. More... over 1 year ago
Update CRAM versions More... over 1 year ago
Add PG header tag to samtools import. More... over 1 year ago
Speed up mpileup by reducing passes through arrays and qual (#1995) More... over 1 year ago
Add region and section/part filtering to CRAM samtools cat. More... almost 2 years ago
Make fastq -d tag:val work for multiple values More... almost 2 years ago
Make consensus --min-depth work for Bayesian mode too More... almost 2 years ago
Document order in which mpileup BAQ happens. More... almost 2 years ago
Add more split on integer tag functional tests More... almost 2 years ago
fix error message in faidx.c More... almost 2 years ago
Add a check for file name validity in options. (#1981) More... almost 2 years ago
Majorly restructure fixmate. More... almost 2 years ago
Add more format string tests More... almost 2 years ago
Add mpileup --output-extra RLEN. (#1971) More... almost 2 years ago
Refactor test_expand_format_string so it's easier to add new tests More... almost 2 years ago
Change default max depth for bedcov. (#1970) More... almost 2 years ago
Merge version number bump and NEWS.md file from master More... almost 2 years ago
Release 1.19.2 More... almost 2 years ago
Add NEWS item More... almost 2 years ago
Add unordered BED file test More... almost 2 years ago
Fix inverted checks for failure of bed_index() and bed_index_core() More... almost 2 years ago
Merge version number bump and NEWS.md file from master More... almost 2 years ago
Release 1.19.1 More... almost 2 years ago
NEWS and copyright date updates (#1973) More... almost 2 years ago
Happy New Year (#1972) More... almost 2 years ago
Add split option to pad numeric values with zeros in file names More... almost 2 years ago
Add a CRAM file size regression test More... almost 2 years ago
Allow splitting by integer tag More... almost 2 years ago
Add MPC to the samtools stats man page More... almost 2 years ago