Open Hub
Open Hub

 Settings |  Report Duplicate

1
I Use This!
Activity Not Available

Commits : Listings

Analyzed over 1 year ago. based on code collected over 1 year ago.
Feb 13, 2023 — Feb 13, 2024
Commit Message Contributor Files Modified Lines Added Lines Removed Code Location Date
JAL-3551 JAL-3931 view pymol commands/responses in Log.trace
Jim Procter
More... over 3 years ago
JAL-3931 remove % and - from ids so Pymol doesn’t strip them out and truncate the structure identifier that Jalview uses to refer to each file
Jim Procter
More... over 3 years ago
JAL-3929 URLencode pdbid to remove problematic characters - propagate urlEncoded ID to the features transferred from the structure file
Jim Procter
More... over 3 years ago
JAL-3930 Added a customizedId="JALVIEW" to launcher for use by file associations. Better for response.varfile installation of Jalview
Ben Soares
More... over 3 years ago
JAL-3930 Added a customizedId="JALVIEW" to launcher for use by file associations. Better for response.varfile installation of Jalview
Ben Soares
More... over 3 years ago
JAL-3904 use new AlignPanel API method
Jim Procter
More... over 3 years ago
JAL-3904 simple method to make an alignPanel the currently viewed one in the alignframe
Jim Procter
More... over 3 years ago
JAL-3594 correct Jalview Develop logo SVG added in [not actually used in application]
Ben Soares
More... over 3 years ago
JAL-3553 added filesize to json
Ben Soares
More... over 3 years ago
JAL-3926 disable autosearch by default
Jim Procter
More... over 3 years ago
JAL-3553 now creating a json file for use on website. It's easier to parse all the info here than on the website!
Ben Soares
More... over 3 years ago
JAL-3553 copy sha256sums to a versioned filename too when created
Ben Soares
More... over 3 years ago
JAL-3553 added customized labels for install4j output.txt
Ben Soares
More... over 3 years ago
JAL-3553 improve the labels in install4j's output.txt and make a versioned filename output-JALVIEW_VERSION.txt
Ben Soares
More... over 3 years ago
Merge branch 'develop' into releases/Release_2_11_2_Branch
Jim Procter
More... over 3 years ago
JAL-3855 verify pdb suffix is preserved when locally loaded file is saved in project and imported
Jim Procter
More... over 3 years ago
JAL-3855 JAL-1731 reuse the StructureViewer.fetchPdbFile(PDBEntry) method in JmolBinding - avoid code duplication for retrieval and import of 3d data
Jim Procter
More... over 3 years ago
JAL-3855 try harder to ignore DNA/RNA only structures when deciding whether to download from SIFTS
Jim Procter
More... over 3 years ago
JAL-3921 wait around until session file has been written
Jim Procter
More... over 3 years ago
Merge branch 'develop' into releases/Release_2_11_2_Branch
Jim Procter
More... over 3 years ago
JAL-3829 remove duplicate IDs in 3DBeacons generated PDBFTS query and update mocks
Jim Procter
More... over 3 years ago
Merge branch 'develop' into releases/Release_2_11_2_Branch
Jim Procter
More... over 3 years ago
JAL-3829 format and tidy up unused code
Jim Procter
More... over 3 years ago
JAL-3919 use model format field to ensure we get the file extension correct when creating temp files for structure viewers
Jim Procter
More... over 3 years ago
JAL-3875 fully reset filter combo-box when fetch 3d-beacons button is pressed, and ensure first 3d-beacons option selected when structures are discovered even when cached structures are present.
Jim Procter
More... over 3 years ago
JAL-3746 Updated help docs for 3D-Beacons. Added and altered images and text.
Ben Soares
More... over 3 years ago
JAL-3915 JAL-3746 documentation for removed rnaview options
Jim Procter
More... over 3 years ago
JAL-3916 TODO for improved selection of covering structures
Jim Procter
More... over 3 years ago
JAL-3916 TODO for improved selection of covering structures
Jim Procter
More... over 3 years ago
JAL-3915 remove RNAview opts from preferences. Still present in config file ready for when we have a new RNA structure processing service
Jim Procter
More... over 3 years ago