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Analyzed over 1 year ago. based on code collected over 1 year ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Feb 13, 2023 — Feb 13, 2024 Showing page 48 of 558 Search / Filter on:
JAL-3837 GPL license on splashscreen (finally !) and added link to discourse.jalview.org to replace mailing list	Jim Procter	More...				over 3 years ago
JAL-3949 report Pymol XMLRPC port via log.info	Jim Procter	More...				over 3 years ago
Merge branch 'develop' into features/r2_11_2_alphafold/JAL-2349_JAL-3855 combined new logic for 2.11.2 3d-beacons with original hack to resolve PAE and CIF Conflicts: src/jalview/ws/dbsources/EBIAlfaFold.java	Jim Procter	More...				over 3 years ago
Merge branch 'develop' into releases/Release_2_11_2_Branch	Jim Procter	More...				over 3 years ago
JAL-1761 backbone type parameter for configuring which atoms are used for superposition of structures	Jim Procter	More...				over 3 years ago
JAL-1761 need to pass molecule type when generating superposition commands	Jim Procter	More...				over 3 years ago
JAL-3551 patch test for altloc handling atom spec in superposition code	Jim Procter	More...				over 3 years ago
JAL-1761 need to pass molecule type when generating superposition commands	Jim Procter	More...				over 3 years ago
JAL-3906 use indicate to highlight current mousedOver residue in Jalview in a Pymol view	Jim Procter	More...				over 3 years ago
JAL-3746 update release date to later in Feb 2022	Jim Procter	More...				over 3 years ago
JAL-3551 pymol documentation	Jim Procter	More...				over 3 years ago
Merge branch 'task/r_2_11_2/JAL-3956_alphaFill_authoritative_IDs' into develop	Jim Procter	More...				over 3 years ago
JAL-3551	Jim Procter	More...				over 3 years ago
JAL-3956 - PDBEntry objects constructed from 3D-Beacons have authoritative IDs overriding any embedded IDs	Jim Procter	More...				over 3 years ago
Merge branch 'update/JAL-3949_jalview_bin_Console_to_cure_sanity_even_more' into develop	Jim Procter	More...				over 3 years ago
JAL-3949 fix testProps path and make line count more accurate	Ben Soares	More...				over 3 years ago
Merge branch 'develop' into releases/Release_2_11_2_Branch	Jim Procter	More...				over 3 years ago
JAL-3949 increase command line ops test timeout	Jim Procter	More...				over 3 years ago
Merge branch 'develop' into releases/Release_2_11_2_Branch	Jim Procter	More...				over 3 years ago
JAL-3949 ensure Jalview command line ops setup actually quits after SETUP_TIME milliseconds - seems there’s less stderr noise than before !	Jim Procter	More...				over 3 years ago
Merge branch 'develop' into releases/Release_2_11_2_Branch	Jim Procter	More...				over 3 years ago
Merge branch 'update/JAL-3949_jalview_bin_Console_to_cure_sanity_even_more' into develop	Jim Procter	More...				over 3 years ago
JAL-3931 fix - escape % symbols after urlencoding	Jim Procter	More...				over 3 years ago
Merge branch 'update/JAL-3949_jalview_bin_Console_to_cure_sanity_even_more' of https://source.jalview.org/git/jalview into update/JAL-3949_jalview_bin_Console_to_cure_sanity_even_more	Ben Soares	More...				over 3 years ago
JLogger loglevel check on whether to call the actual logger or not. New factory methods with Class.	Ben Soares	More...				over 3 years ago
JAL-3949 - refactor logging from jalview.bin.Cache to jalview.bin.Console	Jim Procter	More...				over 3 years ago
JAL-3949 fixed failing commandlinetests due to more output and line count limit	Ben Soares	More...				over 3 years ago
JAL-3949 added Java Console autoscrolling help paragraph	Ben Soares	More...				over 3 years ago
JAL-3949 read ~/.jalview_properties before initialising the logging	Ben Soares	More...				over 3 years ago
Merge branch 'develop' into update/JAL-3949_abstracted_logging_for_jalviewjs_and_sanity	Ben Soares	More...				over 3 years ago

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