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Analyzed over 1 year ago. based on code collected over 1 year ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Feb 13, 2023 — Feb 13, 2024 Showing page 29 of 558 Search / Filter on:
JAL-4134 allow tree groups to be stored/recovered on contact matrix for groupwise column selection	James Procter	More...				over 2 years ago
JAL-629 Fix Exceptions when running with CLI not headless	Ben Soares	More...				over 2 years ago
JAL-629 Guesstimate whether to set pLDDT with PDB file	Ben Soares	More...				over 2 years ago
JAL-629 JAL-4124 JAL-3855 remove deleted debugging test file from tests	Ben Soares	More...				over 2 years ago
Merge branch 'develop' into features/r2_11_2_alphafold/JAL-629	Ben Soares	More...				over 2 years ago
JAL-629 removed debug prints. added .cif. added some comments/code-markers	Ben Soares	More...				over 2 years ago
Merge branch 'develop' into features/JAL-4134_treeviewerforcolumns	James Procter	More...				over 2 years ago
JAL-629 PAE matrix file guesstimate from filename	Ben Soares	More...				over 2 years ago
JAL-629 Position GUI widgets for PDF file options. Remove icon from StructureChooser frame.	Ben Soares	More...				over 2 years ago
JAL-629 JAL-4124 JAL-3855 test to check we can import PAE matrices in a variety of formats - additional test case	James Procter	More...				over 2 years ago
JAL-629 JAL-4124 JAL-3855 test to check we can import PAE matrices in a variety of formats - and fix up a casting issue (again?)	James Procter	More...				over 2 years ago
Merge branch 'develop' into features/r2_11_2_alphafold/JAL-629	Ben Soares	More...				over 2 years ago
JAL-629 add widgets to StructureChooser for tempfac choice and pae matrix file	Ben Soares	More...				over 2 years ago
Merge branch 'features/JAL-3858_PAEsInProjects' into develop	James Procter	More...				over 2 years ago
Merge branch 'features/r2_11_2_alphafold/JAL-629' into features/JAL-3858_PAEsInProjects	James Procter	More...				over 2 years ago
JAL-629 helper function for getting sensible structure (or other arg value)	Ben Soares	More...				over 2 years ago
JAL-629 better test fixes. --props=... instead of --debug	Ben Soares	More...				over 2 years ago
JAL-629 Made ArgValuesMap helper class, simplifies readability/writing of the code and will allow arg position lookups	Ben Soares	More...				over 2 years ago
JAL-629 test fixing	Ben Soares	More...				over 2 years ago
JAL-4134 group columns using a tree cut - seems to work after more egregiousness	James Procter	More...				over 2 years ago
JAL-629 Add debug messages for more failing tests	Ben Soares	More...				over 2 years ago
JAL-4134 - brutal hack to build a tree clustering columns of PAE Matrix	James Procter	More...				over 2 years ago
JAL-629 fixed a Log4j test by adding --debug arg	Ben Soares	More...				over 2 years ago
JAL-629 bootstrap args and properties. Remember index of args for 'previous structure' defaulting of other args	Ben Soares	More...				over 2 years ago
JAL-629 nf-core sample alignment files and a2m versions	Ben Soares	More...				over 2 years ago
JAL-629 fix a PAEMatrix casting error	Ben Soares	More...				over 2 years ago
JAL-4134 tidied up refactoring and fix compilation errrors	James Procter	More...				over 2 years ago
Merge branch 'features/JAL-3858_PAEsInProjects' into features/JAL-4134_treeviewerforcolumns	James Procter	More...				over 2 years ago
JAL-3858 new MatrixType JAX-RI POJO	James Procter	More...				over 2 years ago
JAL-4134 - refactor tree calculation code to work with binaryNode base type.	James Procter	More...				over 2 years ago

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