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Analyzed over 1 year ago. based on code collected over 1 year ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Feb 13, 2023 — Feb 13, 2024 Showing page 12 of 558 Search / Filter on:
JAL-4062 revert to ArrayList and integrate check for 'contained' ranges in sweepsearch	James Procter	More...				almost 2 years ago
JAL-4062 fix up imports	James Procter	More...				almost 2 years ago
JAL-4062 appendResult(seq,start,end) called by structureSelectionManager sweep-searches on add to ensure minimal set of non-contiguous ranges are created. Uses a TreeSet to maintain a sorted list of intervals (may be unnecesary)	James Procter	More...				almost 2 years ago
Merge branch 'improvement/JAL-4250_secondary_structure_annotation_antialias' into merge/big_merge_of_bens_stuff_before_2_11_3_0	Ben Soares	More...				almost 2 years ago
JAL-4250 revert green to bright green	Ben Soares	More...				almost 2 years ago
Merge branch 'improvement/JAL-4250_secondary_structure_annotation_antialias' into merge/big_merge_of_bens_stuff_before_2_11_3_0	Ben Soares	More...				almost 2 years ago
JAL-4250 Conservative setting of ANTIALIAS and readjustment of glyphs to avoid scrolling artifacts by pixel-out positioned glyphs	Ben Soares	More...				almost 2 years ago
JAL-4250 Make secondary structure annotation shapes antialiased and outlined in the same colour for better shape definition.	Ben Soares	More...				almost 2 years ago
Merge branch 'improvement/JAL-4206_improve_JalviewFileChooser_for_flatlaf' into merge/big_merge_of_bens_stuff_before_2_11_3_0	Ben Soares	More...				almost 2 years ago
Merge branch 'bug/JAL-4214_system_freeze_when_opening_file_using_gui_in_linux' into merge/big_merge_of_bens_stuff_before_2_11_3_0	Ben Soares	More...				almost 2 years ago
Merge branch 'improvement/JAL-4212_remove_macos_test_java_icons' into merge/big_merge_of_bens_stuff_before_2_11_3_0	Ben Soares	More...				almost 2 years ago
Merge branch 'feature/JAL-244_Automatically_adjust_left_margin_to_avoid_cropping_annotation_labels' into merge/big_merge_of_bens_stuff_before_2_11_3_0	Ben Soares	More...				almost 2 years ago
Merge branch 'improvement/JAL-3830_remove_dock_icon_in_headless_mode' into merge/big_merge_of_bens_stuff_before_2_11_3_0	Ben Soares	More...				almost 2 years ago
Merge branch 'bug/JAL-4242_exception_when_pressing_escape_in_fetch_from_URL_dialog' into merge/big_merge_of_bens_stuff_before_2_11_3_0	Ben Soares	More...				almost 2 years ago
JAL-3416 Remove full height separators between new curved tabs	Ben Soares	More...				almost 2 years ago
JAL-3416 flatlaf and flatlaf-extras 3.2 jars	Ben Soares	More...				almost 2 years ago
JAL-4242 null check on getValue() return	Ben Soares	More...				almost 2 years ago
Merge branch 'feature/JAL-629_--output_-_means_output_to_STDOUT' into improvement/JAL-3830_remove_dock_icon_in_headless_mode	Ben Soares	More...				almost 2 years ago
JAL-3830 JAL-4160 Remove --noheadless as --gui does this. Simplifies wrapper scripts	Ben Soares	More...				almost 2 years ago
JAL-3830 JAL-3421 Conda launch script for 2.11.3 and new CLI with OS compatibility from installer launch script	Ben Soares	More...				almost 2 years ago
Merge branch 'develop' into improvement/JAL-3830_remove_dock_icon_in_headless_mode	Ben Soares	More...				almost 2 years ago
JAL-4160 JAL-3830 Improvements to the jalview.sh bash script especially when not in .app bundle on mac.	Ben Soares	More...				almost 2 years ago
JAL-3820 JAL-4189 Use the same LaunchUtils methods to check java executable symlinks in getdown.	Ben Soares	More...				almost 2 years ago
JAL-3820 JAL-4189 Move checks for java executable symlinks to LaunchUtils ready for use in getdown	Ben Soares	More...				almost 2 years ago
JAL-629 Much better way of dealing with list of filenames/URLs without an --open argument. Added tests for these and fixed multiple STDOUT files.	Ben Soares	More...				almost 2 years ago
JAL-629 more tests for stdout	Ben Soares	More...				almost 2 years ago
JAL-629 STDOUT documentation. Opt.STDOUT narrower option. Fix for subvals and STDOUT detection.	Ben Soares	More...				almost 2 years ago
JAL-629 Change all stdout and stderr output to use Console.outPrintln and Console.errPrintln. Fix command line tests. Add test for STDOUT output file.	Ben Soares	More...				almost 2 years ago
JAL-629 Method to use for printStackTrace	Ben Soares	More...				almost 2 years ago
JAL-629 Move more stdout messages to stderr when outputting file to stdout	Ben Soares	More...				almost 2 years ago

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