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Moderate Activity

Commits : Listings

Analyzed 11 days ago. based on code collected 11 days ago.
May 30, 2023 — May 30, 2024
Commit Message Contributor Files Modified Lines Added Lines Removed Code Location Date
allow longer arrays More... almost 12 years ago
BCF index working on a toy example More... almost 12 years ago
BCF2 index; compiled but not working More... almost 12 years ago
reduced the min chunk size More... almost 12 years ago
bugfix: parent merging not working More... almost 12 years ago
changed magic More... almost 12 years ago
fixed a couple of warnings More... almost 12 years ago
merge a small bin to its parent More... almost 12 years ago
unified index seems to work; optimization needed More... almost 12 years ago
generalize the BAM index More... almost 12 years ago
bam2fq: change the option name More... about 12 years ago
detailed vcfview cmd prompt More... about 12 years ago
added Description to PASS More... about 12 years ago
make BCF APIs similar to BAM APIs More... about 12 years ago
bugfix: bamshuf not working when collision More... about 12 years ago
output the number of reads More... about 12 years ago
bam2fq: output SE reads in the PE mode More... about 12 years ago
added simplified stdint.h, in case it is missing More... about 12 years ago
fixed gcc warnings More... about 12 years ago
System may have an <endian.h>; merge to hts.h More... about 12 years ago
added bam2fq More... about 12 years ago
bamshuf: shuffle BAM More... about 12 years ago
expose bgzf.h More... about 12 years ago
forgot to add Makefile More... about 12 years ago
automatically figure out the index file name More... about 12 years ago
fixed g++ warnings More... about 12 years ago
added the pileup/mpileup interface More... about 12 years ago
removed sam_hdr_t::has_SQ More... about 12 years ago
code cleanup More... about 12 years ago
fix C++ compiling errors and warnings More... about 12 years ago