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Commits : Listings

Analyzed about 16 hours ago. based on code collected 2 days ago.
Sep 11, 2025 — Sep 11, 2026
Commit Message Contributor Files Modified Lines Added Lines Removed Code Location Date
Use bash and pipefail for tests using simple_test_driver.sh (#2083) More... 6 days ago
Reject GZIP cram blocks with impossible compression ratios More... 12 days ago
Simplify zlib_mem_inflate() More... 12 days ago
Use BGZF interface in place of hFILE in cram_index_load() More... 12 days ago
Fix leak of region list in hts_itr_multi_bam() More... 16 days ago
Ensure no libcurl functions are called if curl_global_init() fails More... 17 days ago
Updates from review. More... 18 days ago
Minor makefile improvements to fuzzers. More... 18 days ago
Prevent excessive memory usage in CRAM embed_ref=2 mode More... 18 days ago
Put an upper limit on the number of cram huffman symbols. More... 18 days ago
Minor correction for FUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION mode More... 18 days ago
Make check_copyright.pl better at skipping auto-generated files More... 18 days ago
Protect against explosion in regcomp memory usage. More... 19 days ago
Fix an expression memory leak on failed "default" and "pow" functions More... 19 days ago
Fix hts_expr handling of invalid regexps (NULL pointer write) More... 19 days ago
Ensure bam_sym_lookup nul terminates any strings added. More... 19 days ago
Make sam_format_aux1 'A' type be nul terminated. More... 20 days ago
Refactor bcf_hdr_register_hrec into 3 functions. More... 20 days ago
Improve variable naming in bcf_hdr_register_hrec More... 20 days ago
Improve error handling in bcf_hdr_update_hrec() More... 24 days ago
Add a fuzz_expr tool. More... 24 days ago
Improve robustness of hts expressions. More... 24 days ago
Fix a memory leak in the hts expressions on parse failure More... 24 days ago
Don't replace FILTER ID=PASS in VCF headers if the user supplied their own More... 25 days ago
Prevent semi-initialised kseq_t struct More... 25 days ago
Add validation for l_qseq >= 0 in bam_set1 More... 25 days ago
Optimise resolve_cigar2 More... 26 days ago
Spelling corrections [minor] More... 26 days ago
Fix bam_plp_insertion_mod to handle neighbouring D ops. More... 26 days ago
This will be deleted by `rm -f test/*.tmp` [trivial] More... 26 days ago