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Analyzed 1 day ago. based on code collected 1 day ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
May 14, 2023 — May 14, 2024 Showing page 4 of 109 Search / Filter on:
Prevent CRAM 3 from attempting to write out out-of-bounds ref positions	James Bonfield	More...				6 months ago
Make CRAM internal data structures use hts_pos_t.	James Bonfield	More...				6 months ago
Avoid a NULL pointer deref when erroring writing CRAM to stdout	James Bonfield	More...				6 months ago
Avoid a NULL pointer dereference while building CRAM embedded ref.	James Bonfield	More...				6 months ago
Temporary workaround when excessive memory is required by FORMAT fields	pd3	More...				6 months ago
Document primarily MM/ML and fix base-mod-related typos	John Marshall	More...				6 months ago
Fix a couple of unused value warnings when built with NDEBUG	Rob Davies	More...				6 months ago
Make compiler flag detection work with zig cc	Rob Davies	More...				6 months ago
Reformulate man page for house style	Rob Davies	More...				7 months ago
Update htscodecs to v1.5.2 (2aca18b3)	Rob Davies	More...				7 months ago
Add C++ casts for external headers.	James Bonfield	More...				8 months ago
Add test case compiling the public headers as C++	John Marshall	More...				8 months ago
Always do the CRAM mutex lock/destroys.	James Bonfield	More...				8 months ago
Fix a cram decode hang from block_resize.	James Bonfield	More...				8 months ago
Enable optimisation level -O3 for SAM QUAL+33 formatting.	James Bonfield	More...				8 months ago
Enable SSSE3 intrinsics for nibble parsing	Ruben Vorderman	More...				8 months ago
Fix hfile_libcurl small seek bug	John Marshall	More...				8 months ago
Apply memchr optimisation in the general delimiter case too	John Marshall	More...				8 months ago
Fix BCF/VCF on-the-fly indexing issues	Rob Davies	More...				8 months ago
Fix virtual offset adjustment when indexing on-the-fly	Rob Davies	More...				8 months ago
Fix a minor memory leak in malformed CRAM EXTERNAL blocks. (#1671)	James Bonfield	More...				8 months ago
Fix crypt4gh redirection	Rob Davies	More...				8 months ago
Enable auto-vectorisation in CRAM 3.1 codecs.	James Bonfield	More...				8 months ago
Minor tweaks to bcf_fmt_array and bcf_str_missing usage.	James Bonfield	More...				9 months ago
Fix up some annot-tsv error checks / reports	Rob Davies	More...				9 months ago
Move all annot_tsv tests into their own function	Rob Davies	More...				9 months ago
Simplify test/test.pl	Rob Davies	More...				9 months ago
Fix test/test.pl -F dependencies	Rob Davies	More...				9 months ago
Simplify run_test function	Rob Davies	More...				9 months ago
bgzf_useek fails when offset is above block limits	vasudeva8	More...				9 months ago

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