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Analyzed 1 day ago. based on code collected 1 day ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Apr 26, 2024 — Apr 26, 2025 Showing page 9 of 86 Search / Filter on:
merged	Brian Searle	More...				almost 2 years ago
added option to correct library retention times given a single wide-window search result	Brian Searle	More...				almost 2 years ago
Merged searleb/encyclopedia into master	Caleb Emmons	More...				almost 2 years ago
Merged in plot-no-pdfs (pull request #59)	Caleb Emmons	More...				almost 2 years ago
RetentionTimeTargetDecoyFilterTest is no longer a TestCase since it has no tests.	Caleb Emmons	More...				almost 2 years ago
Give the option to not write pdfs in AbstractRetentionTimeFilter plot method.	Caleb Emmons	More...				almost 2 years ago
Merged searleb/encyclopedia into master	Caleb Emmons	More...				almost 2 years ago
updated test	Brian Searle	More...				almost 2 years ago
fixed temporary space leak when quantifying across several files	Brian Searle	More...				almost 2 years ago
added work towards pre-searching with encyclopedia	Brian Searle	More...				almost 2 years ago
added instrument selection in gui, updated icons	Brian Searle	More...				almost 2 years ago
Merged searleb/encyclopedia into master	Caleb Emmons	More...				almost 2 years ago
added new test	Brian Searle	More...				almost 2 years ago
Merge branch 'master' of bitbucket.org:searleb/encyclopedia	Brian Searle	More...				almost 2 years ago
removed debugging info	Brian Searle	More...				almost 2 years ago
adjusted dilution curve parameters to accept accessions, added examples for tcells	Brian Searle	More...				almost 2 years ago
added termini to fixed library modifier	Brian Searle	More...				almost 2 years ago
finished fast mprophet implementation	Brian Searle	More...				almost 2 years ago
added instrument specific search parameters to the command line	Brian Searle	More...				almost 2 years ago
new code to align GPF fractions, still needs FDR correction to be incorporated	Brian Searle	More...				almost 2 years ago
updated failing unit test	Brian Searle	More...				almost 2 years ago
added -minNumIntegratedRTPoints, updated to default to v2 scoring	Brian Searle	More...				almost 2 years ago
Merge branch 'master' of bitbucket.org:searleb/encyclopedia	Brian Searle	More...				almost 2 years ago
changed match-between-runs integration so it always trusts the inferred boundaries and doesn't get distracted by noise. '-adjustInferredRTBoundaries true' will adjust this back to the original behavior	Brian Searle	More...				almost 2 years ago
Merge branch 'master' of bitbucket.org:searleb/encyclopedia	Brian Searle	More...				almost 2 years ago
lower memory burden when combining very large libraries while assigning a new FASTA database	Brian Searle	More...				almost 2 years ago
updated changelog	Brian Searle	More...				almost 2 years ago
fixed stackoverflowerror in delta mass calculation	Brian Searle	More...				almost 2 years ago
update to minimum intensity based on number of ions (from IIT) so that minIntensity and minIntensityNumIons can both be set/used simultaneously	Brian Searle	More...				almost 2 years ago
fixed protein grouping bug caused by this commit: ee9c657	Brian Searle	More...				almost 2 years ago

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