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Moderate Activity

Commits : Listings

Analyzed 2 days ago. based on code collected 2 days ago.
Nov 21, 2023 — Nov 21, 2024
Commit Message Contributor Files Modified Lines Added Lines Removed Code Location Date
Add another test case for handling training FDR if we relax the test FDR used by Percolator More... almost 2 years ago
Add an extra test case and clean up to reflect expected behavior of train/test/threshold FDRs More... almost 2 years ago
Prevent buggy initial round of Percolator training More... almost 2 years ago
Add unit test for buggy behavior in Percolator 3.05 More... almost 2 years ago
added option to quant using Scribe precursor integration with DIA data More... almost 2 years ago
started work towards SILAC support More... almost 2 years ago
added option to filter out poorly quantified integrations More... almost 2 years ago
added optional background subtraction More... almost 2 years ago
minor interface improvement for quanting from libraries More... almost 2 years ago
minor fix to test More... almost 2 years ago
minor fix to test More... almost 2 years ago
finished testing around quant directly from libraries More... almost 2 years ago
updates towards generalized quant extractor for library files More... almost 2 years ago
edits to test More... almost 2 years ago
improved spectronaut library reading support More... almost 2 years ago
started work towards a chromatogram based scoring system More... almost 2 years ago
started scoring for 2.1 More... almost 2 years ago
fixed bug in parsing primary score for Walnut More... almost 2 years ago
Merge branch 'master' of bitbucket.org:searleb/encyclopedia More... almost 2 years ago
updated scoring tests More... almost 2 years ago
updates to test code More... almost 2 years ago
force spectrum-centric PIN table concatenation with Scribe More... almost 2 years ago
fixed percolator bug with scribe when quantifying peptides More... almost 2 years ago
check if any DDA runs before using min/max when running quant reports More... almost 2 years ago
updated changelog More... almost 2 years ago
Update to next SNAPSHOT version. More... almost 2 years ago
Update to version for release encyclopedia-2.12.30. More... almost 2 years ago
Update to next SNAPSHOT version. More... almost 2 years ago
Update to version for release encyclopedia-2.12.30. More... almost 2 years ago
Merge branch 'master' of bitbucket.org:searleb/encyclopedia More... almost 2 years ago