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Analyzed 2 days ago. based on code collected 2 days ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Jun 01, 2023 — Jun 01, 2024 Showing page 2 of 48 Search / Filter on:
README was so old and out of date I've largely replaced it with the content that used to be in INSTALL.md	ctrapnell	More...				almost 9 years ago
moved README to GFM format, added some extra notes about citing the papers	ctrapnell	More...				almost 9 years ago
Added extra instructions for those who have cloned the repo, rather than building from a source tarball	ctrapnell	More...				almost 9 years ago
Added a warning about Boost version 1.56 and higher. Updated version number on the tarball to be more recent	ctrapnell	More...				almost 9 years ago
forgot a fencepost on one of the bash blocks in INSTALL	ctrapnell	More...				almost 9 years ago
made some fixes to adapt INSTALL file to GFM	ctrapnell	More...				almost 9 years ago
added a draft INSTALL file based on the site's 'Getting Started' page	ctrapnell	More...				almost 9 years ago
I'm reverting the move to pkg-config for detecting Eigen - it doesn't build on several systems that I need to maintain compatibility with. The existing build system works fine for now, and I don't have bandwidth to overhaul it to move to pkg-config generall	ctrapnell	More...				almost 9 years ago
added back eigen autotools file that somehow got deleted by one of the recent merges	ctrapnell	More...				almost 9 years ago
fixed conflict in README	ctrapnell	More...				almost 9 years ago
All random number generators should now respect --seed, which defaults to the default_seed of boost::mt19937.	ctrapnell	More...				almost 9 years ago
Merge pull request #26 from smowton/master	Cole Trapnell	More...				almost 9 years ago
fixed the help for option --olap-radius	ctrapnell	More...				almost 9 years ago
Merge branch 'develop' of github.com:cole-trapnell-lab/cufflinks into develop	ctrapnell	More...				almost 9 years ago
Follow PEP 0394 and use python2 explicitly	Xavier Robin	More...				almost 9 years ago
Move cuffcompare temp files out of working dir	Xavier Robin	More...				almost 9 years ago
improved exon Sn/Pr calculation in cuffcompare	Geo Pertea	More...				almost 9 years ago
cuffcompare fixes; renamed Sp to Pr, dropped stats for fuzzy matches	Geo Pertea	More...				almost 9 years ago
Fixes #23 ; other minor fixes&improvements to GFF/FASTA handling	Geo Pertea	More...				almost 9 years ago
Merge pull request #32 from BenLangmead/master	Cole Trapnell	More...				almost 9 years ago
account for fact that empirical distribution is truncated	Ben Langmead	More...				almost 9 years ago
Merge pull request #27 from wookietreiber/detect-eigen-via-pkg-config	Cole Trapnell	More...				almost 9 years ago
detects eigen3 via pkg-config	Christian Krause	More...				about 9 years ago
Reject reads with no Match entries in their CIGAR string.	Christopher Smowton	More...				about 9 years ago
Merge pull request #7 from gaborcsardi/README-link	Cole Trapnell	More...				over 9 years ago
Fix CuffCompare link in README	Gabor Csardi	More...				over 9 years ago
one more fix for site	ctrapnell	More...				over 9 years ago
Merge pull request #2 from cbrueffer/misc	Cole Trapnell	More...				over 9 years ago
Fix typos and whitespace in cufflinks messages.	Christian Brueffer	More...				over 9 years ago
Report the correct program name in the usage output.	Christian Brueffer	More...				over 9 years ago

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