Analyzed
2 days
ago.
based on code collected
2 days
ago.
Project Summary
Cufflinks assembles transcripts, estimates their abundances, and tests for differential expression and regulation in RNA-Seq samples. It accepts aligned RNA-Seq reads and assembles the alignments into a parsimonious set of transcripts. Cufflinks then estimates the relative abundances of these transcripts based on how many reads support each one, taking into account biases in library preparation protocols.
In a Nutshell, cufflinks...
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took an estimated 21 years of effort (COCOMO model)
starting with its first commit in June, 2010
ending with its most recent commit about 6 years ago
Quick Reference
https://github.com/cole-trapnell...
Boost Software License 1.0
Permitted
Commercial Use
Modify
Distribute
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Hold Liable
Required
Include Copyright
Include License
These details are provided for information only. No information here is legal advice and should not be used as such.
Project Security
Vulnerabilities per Version ( last 10 releases )
There are no reported vulnerabilities
Project Vulnerability Report
Security Confidence Index
Poor security track-record
Favorable security track-record
Vulnerability Exposure Index
Many reported vulnerabilities
Few reported vulnerabilities
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30 Day SummaryJul 25 2025 — Aug 24 2025
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12 Month SummaryAug 24 2024 — Aug 24 2025
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