0
I Use This!
Inactive

Commits : Listings

Analyzed 1 day ago. based on code collected 1 day ago.
Feb 12, 2025 — Feb 12, 2026
Commit Message Contributor Files Modified Lines Added Lines Removed Code Location Date
Filter by species for mapping. More... about 14 years ago
Merge branch 'develop' of /software/vertres/git/origin/vr-codebase into develop More... about 14 years ago
New option for overriding default liftOver parameters More... about 14 years ago
Merge pull request #38 from sanger-pathogens/pipeline More... about 14 years ago
Merge branch 'develop' of /software/vertres/git/origin/vr-codebase into develop More... about 14 years ago
Fixed a bug: correct is -k1,1d, not -k1d More... about 14 years ago
Fixed a typo: do not complain about AC,AF,etc not set to "." if they are. More... about 14 years ago
Merge branch 'develop' of /software/vertres/git/origin/vr-codebase into develop More... about 14 years ago
Do not use the new ordering by default More... about 14 years ago
Merge branch 'develop' of /software/vertres/git/origin/vr-codebase into develop More... about 14 years ago
By default use the new --version-sort of the sort unix command More... about 14 years ago
Merge branch 'develop' of /software/vertres/git/origin/vr-codebase into develop More... about 14 years ago
Merge branch 'develop' of /software/vertres/git/origin/vr-codebase into develop More... about 14 years ago
Fixed a bug in uppercasing ALT alleles (v4.1) More... about 14 years ago
Merge pull request #37 from CraigPorter/mapping More... about 14 years ago
Allow mapping and SNP-calling for two assempblies at same time. More... about 14 years ago
Merge pull request #36 from andrewjpage/filter_out_phix_and_unconcesent_human More... about 14 years ago
filter out phix and unconsented human using imeta More... about 14 years ago
Merge pull request #35 from CraigPorter/pipeline More... about 14 years ago
Fix to fastq import - delete bams after fastq gzipped. More... about 14 years ago
Merge branch 'develop' of /software/vertres/git/origin/vr-codebase into develop More... about 14 years ago
added PASS filter option to vcf-subset-pos. And some minor edits to run-retroseq More... about 14 years ago
Merge pull request #34 from andrewjpage/allow_tasks_to_be_specified_in_import_task More... about 14 years ago
allow import tasks filters to be set in config file More... about 14 years ago
Merge branch 'develop' of /software/vertres/git/origin/vr-codebase into develop More... about 14 years ago
Merge branch 'develop' of /software/vertres/git/origin/vr-codebase into develop More... about 14 years ago
Fill ancestral alleles also for indels More... about 14 years ago
Merge branch 'develop' of /software/vertres/git/origin/vr-codebase into develop More... about 14 years ago
allow generic (non rs) vcf id More... about 14 years ago
Merge branch 'develop' of /software/vertres/git/origin/vr-codebase into develop More... over 14 years ago