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Analyzed 1 day ago. based on code collected 1 day ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Feb 22, 2025 — Feb 22, 2026 Showing page 109 of 136 Search / Filter on:
ssaha2 upgrade	tk2	More...				over 16 years ago
[no comment]	tk2	More...				over 16 years ago
[no comment]	pd3	More...				over 16 years ago
really fixed insert_size; corrected platform arg to add_sam_header call	sb10	More...				over 16 years ago
ref base name for ssaha2Build files now includes the .fasta	sb10	More...				over 16 years ago
fixes to handle insert_size of 0 and to make run_name truly optional	sb10	More...				over 16 years ago
fixed to work with latest run_pipline properly; get lane info from VertRes::Utils::Hierarchy->lane_info()	sb10	More...				over 16 years ago
made run_name optional in add_sam_header()	sb10	More...				over 16 years ago
added lane_info method	sb10	More...				over 16 years ago
removed temp else statement	sb10	More...				over 16 years ago
added is_name_in_database method	sb10	More...				over 16 years ago
[no comment]	pd3	More...				over 16 years ago
[no comment]	pd3	More...				over 16 years ago
[no comment]	pd3	More...				over 16 years ago
made projects argument optional. Defaults to all projects	jstalker	More...				over 16 years ago
Now defaults to only listing sanger-allocated samples for g1k. --all flag turns this off if required.	jstalker	More...				over 16 years ago
Now defaults to only listing sanger-allocated samples for g1k. --all flag turns this off if required.	jstalker	More...				over 16 years ago
Added total columns	jstalker	More...				over 16 years ago
[no comment]	pd3	More...				over 16 years ago
Now defaults to only listing sanger-allocated samples for g1k. --all flag turns this off if required.	jstalker	More...				over 16 years ago
[no comment]	pd3	More...				over 16 years ago
fixed POD suggestion for data option	sb10	More...				over 16 years ago
fixed data option	sb10	More...				over 16 years ago
updated to cope with schema 8; allow any species	sb10	More...				over 16 years ago
[no comment]	pd3	More...				over 16 years ago
added g1k allocations	jstalker	More...				over 16 years ago
[no comment]	jstalker	More...				over 16 years ago
Added get_allocated_seq_centres to return a list of Seq_centre objects that the sample has been allocated to, and is_sanger_sample as a boolean convenience that checks if it's been allocated to Sanger	jstalker	More...				over 16 years ago
added get_centres_for_study_ind. This needs to be changed to call an internal generalised 'get_x_by_y' which can return any slices through the study/centre/individual allocation data. Works for now with specific sql query	jstalker	More...				over 16 years ago
[no comment]	pd3	More...				over 16 years ago

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