Open Hub
Open Hub

 Settings |  Report Duplicate

1
I Use This!
Moderate Activity

Commits : Listings

Analyzed about 1 hour ago. based on code collected about 1 hour ago.
Dec 12, 2024 — Dec 12, 2025
Commit Message Contributor Files Modified Lines Added Lines Removed Code Location Date
Update CHANGES.md and version.txt for 7.2 release (#5118)
github-actions[bot]
More... 7 days ago
Update "Citing SCT" page with missing references and better formatting (#5095)
Joshua Newton
More... 7 days ago
Refactor QC code for six scripts (#5050)
Mathieu Guay-Paquet
More... 7 days ago
Update AP diameter to be based on rotated seg + add new `-anat` flag (for symmetry, quadrant area, and HOG angle properties) (#4958)
Jan Valosek
More... 8 days ago
Update `sct_tutorial_data` links to point to the newest release (SCT Course 2025) (#5114)
Joshua Newton
More... 8 days ago
Fix typo sms_lesion (#5115)
Mathieu Guay-Paquet
More... 8 days ago
Tweak `-ref subject`-related documentation for 3+ labels (#5109)
Joshua Newton
More... 15 days ago
Rework `totalspineseg` inference (rename task to `spine`, set `-step1-only` behavior as default, improve output filenames) (#5097)
Nathan Molinier
More... 15 days ago
Avoid `libffi` bug by installing all of the `conda` packages from `conda-forge` in a single step (#5102)
Joshua Newton
More... 16 days ago
Update pull request template (#5105)
Mathieu Guay-Paquet
More... 17 days ago
Add `vert_level` column to `sct_analyze_lesion` atlas output (#5089)
Jan Valosek
More... 25 days ago
Replace deprecated macOS 13 runners with new `macos-15-intel` runners (#5088)
Joshua Newton
More... 29 days ago
Add new `-test-time-aug` flag for `nnunetv2` models to turn on `use_mirroring` behavior (#5082)
Joshua Newton
More... about 1 month ago
Fix cropping and labeling for `sct_deepseg` axial mosaic QC Reports (#5069)
Joshua Newton
More... about 1 month ago
`studies.rst`: Add St-Onge et al. (Imaging Neurosci. 2025)
Joshua Newton
More... about 1 month ago
Update how `-discfile` intermediate images are saved (output directory, relative paths) (#5074)
Joshua Newton
More... about 1 month ago
Solve projection anomaly on anisotropic data (#5067)
Nathan Molinier
More... about 1 month ago
Clarify `ValueError` if the `-centerline` does not cover all the slices in the input mask (#5077)
Jan Valosek
More... about 1 month ago
Make `spinalcord` a default model to solve `PyTorchStreamReader` error in `sct_run_batch` (#5076)
Joshua Newton
More... about 1 month ago
`studies.rst`: Add 4 studies from October 2025
Joshua Newton
More... about 1 month ago
Update `-centerline` argument to allow for consistent `-discfile` projection (used in aSCOR script) (#5075)
Joshua Newton
More... about 1 month ago
Add new `-yml` arguments to include/exclude both subjects and files based on YAML lists (#5030)
Joshua Newton
More... about 2 months ago
Switch to `neuropoly` fork of `nnunetv2` to support multi-fold "custom trainer" version of `lesion_ms` (#5027)
Pierre-Louis Benveniste
More... about 2 months ago
`studies.rst`: Add Hernandez-Charpak et al. (Imaging Neurosci. 2025)
Joshua Newton
More... about 2 months ago
Restrict `numexpr!=2.14.0` and `h5py!=3.15.0` to address recent installation failures (#5054)
Joshua Newton
More... about 2 months ago
Allow specifying a reference scan as the registration target with new flag `-ref` (#5043)
Julien Cohen-Adad
More... 2 months ago
Refactor the broken link checker (#5047)
Mathieu Guay-Paquet
More... 2 months ago
Allow `blosc2>=3.9.1` due to re-added support for `numpy==1.26` (#5046)
Joshua Newton
More... 2 months ago
Improve moco argparse usage for `-param {poly,iter}` (help descriptions) and `-g` (positive integer requirement) (#5040)
Julien Cohen-Adad
More... 2 months ago
Pin `blosc2<3.9.0` to avoid failing PRs due to incompatibility wiht `numpy<2.0` (#5044)
Joshua Newton
More... 2 months ago